Package org.apache.airavata.commons.gfac.type

Examples of org.apache.airavata.commons.gfac.type.ApplicationDescription

35
36
37
38
39
40
41
42
43
44
45
46
    private static final Logger log = LoggerFactory.getLogger(LocalDirectorySetupHandler.class);

    public void invoke(JobExecutionContext jobExecutionContext) throws GFacHandlerException {
        log.info("Invoking GramDirectorySetupHandler ...");
        HostDescriptionType type = jobExecutionContext.getApplicationContext().getHostDescription().getType();
        ApplicationDescription applicationDeploymentDescription = jobExecutionContext.getApplicationContext().getApplicationDeploymentDescription();
        ApplicationDeploymentDescriptionType app = applicationDeploymentDescription.getType();
        log.debug("working diectroy = " + app.getStaticWorkingDirectory());
        log.debug("temp directory = " + app.getScratchWorkingDirectory());

        makeFileSystemDir(app.getStaticWorkingDirectory(),jobExecutionContext);
        makeFileSystemDir(app.getScratchWorkingDirectory(),jobExecutionContext);
View Full Code Here
126
127
128
129
130
131
132
133
134
135
136
137
                    // and this handler is not able to find std* files?
                    try {
                     stdout = ftp.readRemoteFile(stdoutURI, gssCred, localStdOutFile);
                     stderr = ftp.readRemoteFile(stderrURI, gssCred, localStdErrFile);
                     //TODO: do we also need to set them as output parameters for another job
                     ApplicationDescription application = jobExecutionContext.getApplicationContext().getApplicationDeploymentDescription();
                     ApplicationDeploymentDescriptionType appDesc = application.getType();
                     appDesc.setStandardOutput(stdout);
                     appDesc.setStandardError(stderr);
                     jobExecutionContext.getApplicationContext().setApplicationDeploymentDescription(application);
                    }
                    catch(ToolsException e) {
View Full Code Here
300
301
302
303
304
305
306
307
308
309
310
                registeredHost = hostScheduler.schedule(registeredHosts);
            } else {
                // if user specify a host, no matter what we pick that host for all the nodes, todo: allow users to specify node specific host
                registeredHost = airavataAPI.getApplicationManager().getHostDescription(hostName);
            }
            ApplicationDescription applicationDescription =
                    airavataAPI.getApplicationManager().getApplicationDescription(serviceName, registeredHost.getType().getHostName());

            // When we run getInParameters we set the actualParameter object, this has to be fixed
            URL resource = EmbeddedGFacInvoker.class.getClassLoader().getResource("gfac-config.xml");
            OMElement inputMessage = getInParameters();
View Full Code Here
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
                if (isNewDescritor()) {
          String baseName = "Application";
          int i = 1;
          String defaultName = baseName + i;
          try {
            ApplicationDescription applicationDescription = getRegistry()
                .getApplicationManager().getApplicationDescription(getServiceName(),
                                        getHostName());
            while (true) {
              boolean notFound = true;
              if (applicationDescription.getType()
                  .getApplicationName().getStringValue()
                  .equals(defaultName)) {
                notFound = false;
                break;
              }
View Full Code Here
534
535
536
537
538
539
540
541
542
543
544
    }

    public ApplicationDescription getShellApplicationDescription() {
        if(shellApplicationDescription == null){
            if (isNewDescritor()) {
        shellApplicationDescription = new ApplicationDescription();
      }else{
        try {
          shellApplicationDescription= ApplicationDescription.fromXML(getOriginalDescription().toXML());
        } catch (XmlException e) {
          //shouldn't happen (hopefully)
View Full Code Here
654
655
656
657
658
659
660
661
662
663
664
    private void validateDialog() throws Exception {
        if (getApplicationName() == null || getApplicationName().trim().equals("")) {
            throw new Exception("Name of the application cannot be empty!!!");
        }

        ApplicationDescription descriptions = null;
        try {
            descriptions = getRegistry().getApplicationManager().getApplicationDescriptor(getServiceName(), getHostName(),
                    getApplicationName());
        } catch (AiravataAPIInvocationException e) {
            throw e;
View Full Code Here
307
308
309
310
311
312
313
314
315
316
317
                registeredHost = hostScheduler.schedule(registeredHosts);
            } else {
                // if user specify a host, no matter what we pick that host for all the nodes, todo: allow users to specifi node specific host
                registeredHost = airavataAPI.getApplicationManager().getHostDescription(hostName);
            }
            ApplicationDescription applicationDescription =
                    airavataAPI.getApplicationManager().getApplicationDescription(serviceName, registeredHost.getType().getHostName());

            // When we run getInParameters we set the actualParameter object, this has to be fixed
            URL resource = EmbeddedGFacInvoker.class.getClassLoader().getResource("gfac-config.xml");
            OMElement inputMessage = getInParameters();
View Full Code Here
229
230
231
232
233
234
235
236
237
238
239
          if (serviceDescriptionDialog.isServiceCreated()) {
          loadDescriptors();
        }
          break;
        case APPLICATION:
                ApplicationDescription a = (ApplicationDescription) getSelected();
                String[] s = dlist.get(a).split("\\$");
                ApplicationDescriptionDialog aDescriptionDialog = new ApplicationDescriptionDialog(engine, false, a, s[1], s[0]);
                aDescriptionDialog.setLocationRelativeTo(this.engine.getGUI().getFrame());
                aDescriptionDialog.open();
                if (aDescriptionDialog.isApplicationDescCreated()) {
View Full Code Here
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
          title = "Service description";
          question = "Are you sure that you want to remove the applications associated with \""
                      + d.getType().getName() + "\"?";
          break;
        case APPLICATION:
          ApplicationDescription a = (ApplicationDescription) getSelected();
          title = "Service description";
          question = "Are you sure that you want to remove the service description \""
                      + a.getType().getApplicationName().getStringValue() + "\"?";
          break;
      }
     
       
    if (askQuestion(title, question)) {
              switch (descriptorType){
              case HOST:
                HostDescription h = (HostDescription) getSelected();
                  getAPI().getApplicationManager().deleteHostDescription(h.getType().getHostName());
                        loadDescriptors();
                break;
              case SERVICE:
                  ServiceDescription d = (ServiceDescription) getSelected();
                  getAPI().getApplicationManager().deleteServiceDescription(d.getType().getName());
                        loadDescriptors();
                break;
              case APPLICATION:
                ApplicationDescription a = (ApplicationDescription) getSelected();
                String[] s = dlist.get(a).split("\\$");
                  getAPI().getApplicationManager().deleteApplicationDescription(s[0], s[1], a.getType().getApplicationName().getStringValue());
                loadDescriptors();
                        break;
              }
//        loadDescriptors();
        }
View Full Code Here
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
     * @return shell command to be executed
     * @throws GFacProviderException GFacProviderException
     */
    private String createShellCmd(JobExecutionContext jobExecutionContext) throws GFacProviderException {
        String command = "";
        ApplicationDescription appDesc = jobExecutionContext.getApplicationContext().
                getApplicationDeploymentDescription();

        if(appDesc.getType() instanceof Ec2ApplicationDeploymentType) {
            Ec2ApplicationDeploymentType type = (Ec2ApplicationDeploymentType) appDesc.getType();
            if(type.getExecutable() != null) {
                command = type.getExecutableType() + " " + type.getExecutable();
            } else {
                command = "sh" + " " + type.getExecutable();
            }
            command = setCmdParams(jobExecutionContext, command);

        } else {
            ApplicationDeploymentDescriptionType type = appDesc.getType();
            command = "sh" + " " + type.getExecutableLocation();
            command = setCmdParams(jobExecutionContext, command);
        }

        return command + '\n';
View Full Code Here
TOP

Related Classes of org.apache.airavata.commons.gfac.type.ApplicationDescription

  • org.apache.airavata.api.samples.CreateApplication
  • org.apache.airavata.api.server.handler.ApplicationCatalogHandler
  • org.apache.airavata.client.api.builder.DescriptorBuilder
  • org.apache.airavata.client.tools.DocumentCreator
  • org.apache.airavata.client.tools.UltrascanDocumentCreator
  • org.apache.airavata.core.gfac.scheduler.impl.SchedulerImpl
  • org.apache.airavata.core.gfac.services.impl.BESParallelJobTest
  • org.apache.airavata.core.gfac.services.impl.BESProviderTest
  • org.apache.airavata.core.gfac.services.impl.BigRed2Test
  • org.apache.airavata.core.gfac.services.impl.BigRed2TestWithSSHAuth
    • Copyright © 2018 www.massapicom. All rights reserved.
    All source code are property of their respective owners. Java is a trademark of Sun Microsystems, Inc and owned by ORACLE Inc. Contact coftware#gmail.com.