Package org.apache.airavata.commons.gfac.type

Examples of org.apache.airavata.commons.gfac.type.ApplicationDescription

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        host.getType().setHostAddress(properties.getProperty("host.fqdn.name"));
        ((GlobusHostType) host.getType()).setGridFTPEndPointArray(new String[]{properties.getProperty("gridftp.endpoint")});
        ((GlobusHostType) host.getType()).setGlobusGateKeeperEndPointArray(new String[]{properties.getProperty("gram.endpoints")});

        /* Application */
        ApplicationDescription appDesc = new ApplicationDescription(HpcApplicationDeploymentType.type);
        HpcApplicationDeploymentType app = (HpcApplicationDeploymentType) appDesc.getType();
        app.setNodeCount(1);
        ApplicationDeploymentDescriptionType.ApplicationName name = appDesc.getType().addNewApplicationName();
        name.setStringValue("MockPwscfMPI");
        app.setExecutableLocation("/share/home/01437/ogce/airavata-test/applications/MockPwscf/pwscf.w");
        app.setScratchWorkingDirectory(properties.getProperty("scratch.working.directory"));
        app.setStaticWorkingDirectory("/share/home/01437/ogce/airavata-test/applications/MockPwscf");
        app.setCpuCount(4);
        app.setJobType(JobTypeType.MPI);
        app.setMaxWallTime(9);
        ProjectAccountType projectAccountType = ((HpcApplicationDeploymentType) appDesc.getType()).addNewProjectAccount();
        projectAccountType.setProjectAccountNumber(properties.getProperty("allocation.charge.number"));

        /* Service */
        ServiceDescription serv = new ServiceDescription();
        serv.getType().setName("MockPwscfMPIService");
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        /*
        * Application deployment description
        */
        ApplicationDescription appDesc = new ApplicationDescription(HpcApplicationDeploymentType.type);
        HpcApplicationDeploymentType app = (HpcApplicationDeploymentType) appDesc.getType();
        app.setCpuCount(1);
        app.setNodeCount(1);
        ApplicationDeploymentDescriptionType.ApplicationName name = appDesc.getType().addNewApplicationName();
        name.setStringValue("FileBreed");
        app.setExecutableLocation("/bin/echo");
        app.setScratchWorkingDirectory(properties.getProperty("scratch.working.directory"));
        app.setCpuCount(1);
        ProjectAccountType projectAccountType = ((HpcApplicationDeploymentType) appDesc.getType()).addNewProjectAccount();
        projectAccountType.setProjectAccountNumber(properties.getProperty("allocation.charge.number"));
        QueueType queueType = app.addNewQueue();
        queueType.setQueueName(properties.getProperty("defualt.queue"));
       
        /*
 
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    }

    public static ApplicationDescription registerApplication(String appName, String exeuctableLocation, String scratchWorkingDirectory, String hostName,
                                                                       String projAccNumber, String queueName, String cpuCount, String nodeCount, String maxMemory) throws Exception {
        // Create Application Description
        ApplicationDescription appDesc = new ApplicationDescription(HpcApplicationDeploymentType.type);
        HpcApplicationDeploymentType app = (HpcApplicationDeploymentType) appDesc.getType();
        app.setCpuCount(Integer.parseInt(cpuCount));
        app.setNodeCount(Integer.parseInt(nodeCount));
        ApplicationDeploymentDescriptionType.ApplicationName name = appDesc.getType().addNewApplicationName();
        name.setStringValue(appName);
        app.setExecutableLocation(exeuctableLocation);
        app.setScratchWorkingDirectory(scratchWorkingDirectory);
        ProjectAccountType projectAccountType = ((HpcApplicationDeploymentType) appDesc.getType()).addNewProjectAccount();
        projectAccountType.setProjectAccountNumber(projAccNumber);
        QueueType queueType = app.addNewQueue();
        queueType.setQueueName(queueName);
        app.setMaxMemory(Integer.parseInt(maxMemory));
        return appDesc;
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        serviceDescriptor.setOutputParams(outputParams);
        return serviceDescriptor;
    }

    public static ApplicationDescription createApplicationDescription(ApplicationDescriptor applicationDescriptor){
        ApplicationDescription applicationDescription = new ApplicationDescription();
        ApplicationDeploymentDescriptionType.ApplicationName name = ApplicationDeploymentDescriptionType.ApplicationName.Factory.newInstance();
        name.setStringValue(applicationDescriptor.getName());
        applicationDescription.getType().setApplicationName(name);
        applicationDescription.getType().setExecutableLocation(applicationDescriptor.getExecutablePath());
        applicationDescription.getType().setScratchWorkingDirectory(applicationDescriptor.getWorkingDir());

        if (applicationDescriptor.getInputDir() != null){
            applicationDescription.getType().setInputDataDirectory(applicationDescriptor.getInputDir());
        }
        if (applicationDescriptor.getOutputDir() != null){
            applicationDescription.getType().setOutputDataDirectory(applicationDescriptor.getOutputDir());
        }
        if (applicationDescriptor.getStdIn() != null){
            applicationDescription.getType().setStandardInput(applicationDescriptor.getStdIn());
        }
        if (applicationDescriptor.getStdOut() != null){
            applicationDescription.getType().setStandardOutput(applicationDescriptor.getStdOut());
        }
        if (applicationDescriptor.getStdError() != null){
            applicationDescription.getType().setStandardError(applicationDescriptor.getStdError());
        }
        if (applicationDescriptor.getStaticWorkigDir() != null){
            applicationDescription.getType().setStaticWorkingDirectory(applicationDescriptor.getStaticWorkigDir());
        }
        HashMap<String,String> environmentVariables = applicationDescriptor.getEnvironmentVariables();
        if (environmentVariables != null && !environmentVariables.isEmpty()){
            NameValuePairType[] appEnviVariablesArray = new NameValuePairType[environmentVariables.size()];
            for(String key : environmentVariables.keySet()) {
                int i = 0;
                NameValuePairType nameValuePairType = applicationDescription.getType().addNewApplicationEnvironment();
                nameValuePairType.setName(key);
                nameValuePairType.setValue(environmentVariables.get(key));
                appEnviVariablesArray[i] = nameValuePairType;
                i++;
            }
            applicationDescription.getType().setApplicationEnvironmentArray(appEnviVariablesArray);
        }

        //set advanced options according app desc type
        if(applicationDescriptor.getApplicationDescType() != null && !applicationDescriptor.getApplicationDescType().isEmpty()){
            if (applicationDescriptor.getApplicationDescType().equals(ApplicationDescriptorTypes.HPC_APP_DEP_DESC_TYPE)){
                ApplicationDescription appDesc = new ApplicationDescription(HpcApplicationDeploymentType.type);
                appDesc.getType().setApplicationName(name);
                appDesc.getType().setExecutableLocation(applicationDescriptor.getExecutablePath());
                appDesc.getType().setScratchWorkingDirectory(applicationDescriptor.getWorkingDir());

                if (applicationDescriptor.getInputDir() != null){
                    appDesc.getType().setInputDataDirectory(applicationDescriptor.getInputDir());
                }
                if (applicationDescriptor.getOutputDir() != null){
                    appDesc.getType().setOutputDataDirectory(applicationDescriptor.getOutputDir());
                }
                if (applicationDescriptor.getStdIn() != null){
                    appDesc.getType().setStandardInput(applicationDescriptor.getStdIn());
                }
                if (applicationDescriptor.getStdOut() != null){
                    appDesc.getType().setStandardOutput(applicationDescriptor.getStdOut());
                }
                if (applicationDescriptor.getStdError() != null){
                    appDesc.getType().setStandardError(applicationDescriptor.getStdError());
                }
                if (applicationDescriptor.getStaticWorkigDir() != null){
                    appDesc.getType().setStaticWorkingDirectory(applicationDescriptor.getStaticWorkigDir());
                }
                HashMap<String,String> envVariables = applicationDescriptor.getEnvironmentVariables();
                if (envVariables != null && !envVariables.isEmpty()){
                    NameValuePairType[] appEnviVariablesArray = new NameValuePairType[envVariables.size()];
                    for(String key : envVariables.keySet()) {
                        int i = 0;
                        NameValuePairType nameValuePairType = applicationDescription.getType().addNewApplicationEnvironment();
                        nameValuePairType.setName(key);
                        nameValuePairType.setValue(envVariables.get(key));
                        appEnviVariablesArray[i] = nameValuePairType;
                        i++;
                    }
                    appDesc.getType().setApplicationEnvironmentArray(appEnviVariablesArray);
                }

                HpcApplicationDeploymentType app = (HpcApplicationDeploymentType) appDesc.getType();

                ProjectAccountType projectAccountType = app.addNewProjectAccount();
                if (applicationDescriptor.getProjectNumber() != null){
                    projectAccountType.setProjectAccountNumber(applicationDescriptor.getProjectNumber());
                }
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                    + " does not found on resource Catalog " + registryService);

        /*
         * Load app
         */
        ApplicationDescription app = null;
        try {
            app = registryService.getApplicationManager().getApplicationDescription(context.getServiceName(),
                    getRegisteredHost(registryService, context.getServiceName()).getType().getHostName());
        } catch (AiravataAPIInvocationException e2) {
            e2.printStackTrace();
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          if (serviceDescriptionDialog.isServiceCreated()) {
          loadDescriptors();
        }
          break;
        case APPLICATION:
                ApplicationDescription a = (ApplicationDescription) getSelected();
                String[] s = dlist.get(a).split("\\$");
                ApplicationDescriptionDialog aDescriptionDialog = new ApplicationDescriptionDialog(engine, false, a, s[1], s[0]);
                aDescriptionDialog.setLocationRelativeTo(this.engine.getGUI().getFrame());
                aDescriptionDialog.open();
                if (aDescriptionDialog.isApplicationDescCreated()) {
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          title = "Service description";
          question = "Are you sure that you want to remove the applications associated with \""
                      + d.getType().getName() + "\"?";
          break;
        case APPLICATION:
          ApplicationDescription a = (ApplicationDescription) getSelected();
          title = "Service description";
          question = "Are you sure that you want to remove the service description \""
                      + a.getType().getApplicationName().getStringValue() + "\"?";
          break;
      }
     
       
    if (askQuestion(title, question)) {
              switch (descriptorType){
              case HOST:
                HostDescription h = (HostDescription) getSelected();
                  getRegistry().getApplicationManager().deleteHostDescription(h.getType().getHostName());
                        loadDescriptors();
                break;
              case SERVICE:
                  ServiceDescription d = (ServiceDescription) getSelected();
                  getRegistry().getApplicationManager().deleteServiceDescription(d.getType().getName());
                        loadDescriptors();
                break;
              case APPLICATION:
                ApplicationDescription a = (ApplicationDescription) getSelected();
                String[] s = dlist.get(a).split("\\$");
                  getRegistry().getApplicationManager().deleteApplicationDescription(s[0], s[1], a.getType().getApplicationName().getStringValue());
                loadDescriptors();
                        break;
              }
//        loadDescriptors();
        }
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            throw new RuntimeException("Failed : HTTP error code : "
                    + status);
        }

        ApplicationDescriptor applicationDescriptor = response.getEntity(ApplicationDescriptor.class);
        ApplicationDescription applicationDescription =
                DescriptorUtil.createApplicationDescription(applicationDescriptor);
        return applicationDescription;
    }
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            throw new RuntimeException("Failed : HTTP error code : "
                    + status);
        }

        ApplicationDescriptor applicationDescriptor = response.getEntity(ApplicationDescriptor.class);
        ApplicationDescription applicationDescription =
                DescriptorUtil.createApplicationDescription(applicationDescriptor);
        return applicationDescription;
    }
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                response.getEntity(ApplicationDescriptorList.class);
        ApplicationDescriptor[] applicationDescriptors =
                applicationDescriptorList.getApplicationDescriptors();

        for (ApplicationDescriptor applicationDescriptor : applicationDescriptors) {
            ApplicationDescription applicationDescription =
                    DescriptorUtil.createApplicationDescription(applicationDescriptor);
            applicationDeploymentDescriptionMap.put(
                    applicationDescriptor.getHostdescName(), applicationDescription);
        }
        return applicationDeploymentDescriptionMap;
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