List of copyFs() Examples

Examples of copyFs()

org.apache.uima.util.CasCopier.copyFs()
Copy 1 feature structure to a new Cas View. No indexing of the new FS is done. If the FS has been copied previously (using this CasCopier instance) the same identical copy will be returned rather than making another copy. @param aFS @return a deep copy of the Feature Structure - any referred to FSs will also be copied.

Examples of org.apache.uima.util.CasCopier.copyFs()

    for (Annotation annotation : annotationIndex) {
      // TODO be careful here, because some people inherit from DocumentAnnotation
      if (typeSystem.subsumes(docType, annotation.getType())) {
        continue;
      }
      Annotation clone = (Annotation) casCopier.copyFs(annotation);
      // change the view/sofa of the new annotation...
      // see: http://osdir.com/ml/apache.uima.general/2007-09/msg00107.html
      clone.setFeatureValue(modview.getTypeSystem()
              .getFeatureByFullName(CAS.FEATURE_FULL_NAME_SOFA), modview.getSofa());
      final int mappedBegin = map[clone.getBegin()];

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Examples of org.apache.uima.util.CasCopier.copyFs()

    }


    for (AnnotationFS fs : docCas.getAnnotationIndex()) {
      if (!slotTypes.contains(fs.getType())
              && !fs.getType().equals(docCas.getDocumentAnnotation().getType())) {
        FeatureStructure copyFs = cc.copyFs(fs);
        testCas.addFsToIndexes(copyFs);
      }
    }
  }

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Examples of org.apache.uima.util.CasCopier.copyFs()

    for (Annotation annotation : annotationIndex) {
      // TODO be careful here, because some people inherit from DocumentAnnotation
      if (typeSystem.subsumes(docType, annotation.getType())) {
        continue;
      }
      Annotation clone = (Annotation) casCopier.copyFs(annotation);
      // change the view/sofa of the new annotation...
      // see: http://osdir.com/ml/apache.uima.general/2007-09/msg00107.html
      clone.setFeatureValue(modview.getTypeSystem()
              .getFeatureByFullName(CAS.FEATURE_FULL_NAME_SOFA), modview.getSofa());
      final int mappedBegin = map[clone.getBegin()];

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Examples of org.apache.uima.util.CasCopier.copyFs()

    CasCopier casCopier = new CasCopier(fromJcas.getCas(), modview.getCas());
    for (Annotation annotation : annotationIndex) {
      if (typeSystem.subsumes(docType, annotation.getType())) {
        continue;
      }
      Annotation clone = (Annotation) casCopier.copyFs(annotation);
      // change the view/sofa of the new annotation...
      // see: http://osdir.com/ml/apache.uima.general/2007-09/msg00107.html
      clone.setFeatureValue(modview.getTypeSystem()
              .getFeatureByFullName(CAS.FEATURE_FULL_NAME_SOFA), modview.getSofa());
      final int mappedBegin = map[clone.getBegin()];

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Examples of org.apache.uima.util.CasCopier.copyFs()

      List<IdentifiedAnnotation> goldMentions = new ArrayList<IdentifiedAnnotation>();
      goldMentions.addAll(JCasUtil.select(goldView, EntityMention.class));
      goldMentions.addAll(JCasUtil.select(goldView, Modifier.class));
      CasCopier copier = new CasCopier(goldView.getCas(), systemView.getCas());
      for (IdentifiedAnnotation goldMention : goldMentions) {
        Annotation copy = (Annotation) copier.copyFs(goldMention);
        Feature sofaFeature = copy.getType().getFeatureByBaseName("sofa");
        copy.setFeatureValue(sofaFeature, systemView.getSofa());
        copy.addToIndexes();
      }
    }

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Examples of org.apache.uima.util.CasCopier.copyFs()

      List<IdentifiedAnnotation> cTakesMentions = new ArrayList<IdentifiedAnnotation>();
      cTakesMentions.addAll(JCasUtil.select(systemView, EntityMention.class));
      cTakesMentions.addAll(JCasUtil.select(systemView, Modifier.class));
      CasCopier copier = new CasCopier(systemView.getCas(), goldView.getCas());
      for (IdentifiedAnnotation cTakesMention : cTakesMentions) {
        Annotation copy = (Annotation) copier.copyFs(cTakesMention);
        Feature sofaFeature = copy.getType().getFeatureByBaseName("sofa");
        copy.setFeatureValue(sofaFeature, goldView.getSofa());
        copy.addToIndexes();
      }

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Examples of org.apache.uima.util.CasCopier.copyFs()

      }
      CasCopier copier = new CasCopier(goldView.getCas(), systemView.getCas());
      Feature sofaFeature = jCas.getTypeSystem().getFeatureByFullName(CAS.FEATURE_FULL_NAME_SOFA);
      for (Class<? extends TOP> annotationClass : this.annotationClasses) {
        for (TOP annotation : JCasUtil.select(goldView, annotationClass)) {
          TOP copy = (TOP) copier.copyFs(annotation);
          if (copy instanceof Annotation) {
            copy.setFeatureValue(sofaFeature, systemView.getSofa());
          }
          copy.addToIndexes(systemView);
        }

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Examples of org.apache.uima.util.CasCopier.copyFs()

        try {
          componentView = jCas.getView(component.getSimpleName());
          CasCopier casCopy = new CasCopier(jCas.getCas(), componentView.getCas());
          org.apache.uima.cas.Feature sofaFeature = jCas.getTypeSystem().getFeatureByFullName(CAS.FEATURE_FULL_NAME_SOFA);
          for(BaseToken token: tokens){
            BaseToken fs = (BaseToken) casCopy.copyFs(token);
            fs.setFeatureValue(sofaFeature, componentView.getSofa());
            fs.addToIndexes(componentView);
          }
          List<BaseToken> viewTokens = JCasUtil.selectCovered(componentView, BaseToken.class, sentence.getBegin(), sentence.getEnd());
          List<TimeMention> times = JCasUtil.selectCovered(componentView, TimeMention.class, sentence);

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Examples of org.apache.uima.util.CasCopier.copyFs()

      goldMentions.addAll(JCasUtil.select(goldView, EntityMention.class));
      goldMentions.addAll(JCasUtil.select(goldView, Modifier.class));
      CasCopier copier = new CasCopier(goldView.getCas(), systemView.getCas());
      for (IdentifiedAnnotation goldMention : goldMentions)
      {
        Annotation copy = (Annotation) copier.copyFs(goldMention);
        Feature sofaFeature = copy.getType().getFeatureByBaseName("sofa");
        copy.setFeatureValue(sofaFeature, systemView.getSofa());
        copy.addToIndexes();
      }
    }

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Examples of org.apache.uima.util.CasCopier.copyFs()

      goldMentions.addAll(JCasUtil.select(goldView, EntityMention.class));
      goldMentions.addAll(JCasUtil.select(goldView, Modifier.class));
      CasCopier copier = new CasCopier(goldView.getCas(), systemView.getCas());
      for (IdentifiedAnnotation goldMention : goldMentions)
      {
        Annotation copy = (Annotation) copier.copyFs(goldMention);
        Feature sofaFeature = copy.getType().getFeatureByBaseName("sofa");
        copy.setFeatureValue(sofaFeature, systemView.getSofa());
        copy.addToIndexes();
      }
    }

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