List of copyFs() Examples

Examples of copyFs()

org.apache.uima.util.CasCopier.copyFs()
Copy 1 feature structure to a new Cas View. No indexing of the new FS is done. If the FS has been copied previously (using this CasCopier instance) the same identical copy will be returned rather than making another copy. @param aFS @return a deep copy of the Feature Structure - any referred to FSs will also be copied.

Examples of org.apache.uima.util.CasCopier.copyFs()

      FSIndex index = aJCas.getCas().getAnnotationIndex(type);
      Iterator iter = index.iterator();
      while (iter.hasNext()) {
        FeatureStructure fs = (FeatureStructure) iter.next();
        if (!copiedIndexedFs.contains(fs)) {
          Annotation copyOfFs = (Annotation) copier.copyFs(fs);
          // update begin and end
          copyOfFs.setBegin(copyOfFs.getBegin() + prevDocLen);
          copyOfFs.setEnd(copyOfFs.getEnd() + prevDocLen);
          mMergedCas.addFsToIndexes(copyOfFs);
          copiedIndexedFs.add(fs);

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Examples of org.apache.uima.util.CasCopier.copyFs()

      goldMentions.addAll(JCasUtil.select(goldView, EntityMention.class));
      goldMentions.addAll(JCasUtil.select(goldView, Modifier.class));
      CasCopier copier = new CasCopier(goldView.getCas(), systemView.getCas());
      for (IdentifiedAnnotation goldMention : goldMentions)
      {
        Annotation copy = (Annotation) copier.copyFs(goldMention);
        Feature sofaFeature = copy.getType().getFeatureByBaseName("sofa");
        copy.setFeatureValue(sofaFeature, systemView.getSofa());
        copy.addToIndexes();
      }
    }

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Examples of org.apache.uima.util.CasCopier.copyFs()

      goldMentions.addAll(JCasUtil.select(goldView, EntityMention.class));
      goldMentions.addAll(JCasUtil.select(goldView, Modifier.class));
      CasCopier copier = new CasCopier(goldView.getCas(), systemView.getCas());
      Feature sofaFeature = jCas.getTypeSystem().getFeatureByFullName(CAS.FEATURE_FULL_NAME_SOFA);
      for (IdentifiedAnnotation goldMention : goldMentions) {
        Annotation copy = (Annotation) copier.copyFs(goldMention);
        copy.setFeatureValue(sofaFeature, systemView.getSofa());
        copy.addToIndexes();
      }


      // copy gold relations to the system view

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Examples of org.apache.uima.util.CasCopier.copyFs()

        copy.addToIndexes();
      }


      // copy gold relations to the system view
      for (BinaryTextRelation goldRelation : JCasUtil.select(goldView, BinaryTextRelation.class)) {
        BinaryTextRelation relation = (BinaryTextRelation) copier.copyFs(goldRelation);
        relation.addToIndexes(systemView);
        for (RelationArgument relArg : Lists.newArrayList(relation.getArg1(), relation.getArg2())) {
          relArg.addToIndexes(systemView);
          // relArg.getArgument() should have been added to indexes with
          // mentions above

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Examples of org.apache.uima.util.CasCopier.copyFs()

      goldMentions.addAll(JCasUtil.select(goldView, EventMention.class));
      goldMentions.addAll(JCasUtil.select(goldView, EntityMention.class));
      goldMentions.addAll(JCasUtil.select(goldView, Modifier.class));
      CasCopier copier = new CasCopier(goldView.getCas(), systemView.getCas());
      for (IdentifiedAnnotation goldMention : goldMentions) {
        Annotation copy = (Annotation) copier.copyFs(goldMention);
        Feature sofaFeature = copy.getType().getFeatureByBaseName("sofa");
        copy.setFeatureValue(sofaFeature, systemView.getSofa());
        copy.addToIndexes();
      }
    }

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Examples of org.apache.uima.util.CasCopier.copyFs()

    for (Annotation annotation : annotationIndex) {
      // TODO be careful here, because some people inherit from DocumentAnnotation
      if (annotation instanceof DocumentAnnotation) {
        continue;
      }
      Annotation clone = (Annotation) casCopier.copyFs(annotation);
      // change the view/sofa of the new annotation...
      // see: http://osdir.com/ml/apache.uima.general/2007-09/msg00107.html
      clone.setFeatureValue(modview.getTypeSystem()
              .getFeatureByFullName(CAS.FEATURE_FULL_NAME_SOFA), modview.getSofa());
      final int mappedBegin = map[clone.getBegin()];

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Examples of org.apache.uima.util.CasCopier.copyFs()

    for (Annotation annotation : annotationIndex) {
      // TODO be careful here, because some people inherit from DocumentAnnotation
      if (typeSystem.subsumes(docType, annotation.getType())) {
        continue;
      }
      Annotation clone = (Annotation) casCopier.copyFs(annotation);
      // change the view/sofa of the new annotation...
      // see: http://osdir.com/ml/apache.uima.general/2007-09/msg00107.html
      clone.setFeatureValue(modview.getTypeSystem()
              .getFeatureByFullName(CAS.FEATURE_FULL_NAME_SOFA), modview.getSofa());
      final int mappedBegin = map[clone.getBegin()];

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Examples of org.apache.uima.util.CasCopier.copyFs()

      goldMentions.addAll(JCasUtil.select(goldView, EntityMention.class));
      goldMentions.addAll(JCasUtil.select(goldView, Modifier.class));
      CasCopier copier = new CasCopier(goldView.getCas(), systemView.getCas());
      for (IdentifiedAnnotation goldMention : goldMentions)
      {
        Annotation copy = (Annotation) copier.copyFs(goldMention);
        Feature sofaFeature = copy.getType().getFeatureByBaseName("sofa");
        copy.setFeatureValue(sofaFeature, systemView.getSofa());
        copy.addToIndexes();
      }
    }

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Examples of org.apache.uima.util.CasCopier.copyFs()

      cTakesMentions.addAll(JCasUtil.select(systemView, EntityMention.class));
      cTakesMentions.addAll(JCasUtil.select(systemView, Modifier.class));
      CasCopier copier = new CasCopier(systemView.getCas(), goldView.getCas());
      for (IdentifiedAnnotation cTakesMention : cTakesMentions)
      {
        Annotation copy = (Annotation) copier.copyFs(cTakesMention);
        Feature sofaFeature = copy.getType().getFeatureByBaseName("sofa");
        copy.setFeatureValue(sofaFeature, goldView.getSofa());
        copy.addToIndexes();
      }

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