Examples of consumesReadBases()

Examples of htsjdk.samtools.CigarOperator.consumesReadBases()

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                if (previousOp == CigarOperator.S || previousOp == CigarOperator.H)
                    return true;

                lastOp = op;

                if (!hasMeaningfulElements && op.consumesReadBases()) {
                    hasMeaningfulElements = true;
                }

                if (op == CigarOperator.I || op == CigarOperator.D) {
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Examples of net.sf.samtools.CigarOperator.consumesReadBases()

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        lastOpLen = rfLen;
        lastOpPos = f.getPosition();
      } else
        lastOpLen += rfLen;

      if (!co.consumesReadBases())
        lastOpPos -= rfLen;
    }

    if (lastOperator != null) {
      if (lastOperator != CigarOperator.M) {
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