Examples of RootOntologySource

org.apache.stanbol.ontologymanager.ontonet.api.io.RootOntologySource
org.apache.stanbol.ontologymanager.sources.owlapi.RootOntologySource
An input source that provides the supplied OWL ontology straight away or from its physical resource. The physical IRI is either obtained from the default document IRI in the ontology, or supplied manually using the appropriate constructor (e.g. retrieved from the ontology manager that actually loaded the ontology).

Note that, no matter what constructor is used, the expected behavior of {@link OntologyInputSource}consumers remains the same, i.e. the root ontology is checked first, and then its physical origin. @author alexdma

Examples of org.apache.stanbol.ontologymanager.sources.owlapi.RootOntologySource

    }


    // @Test
    public void zombieSessionClearsContents() throws Exception {
        Session ses = sessionManager.createSession();
        ses.addOntology(new RootOntologySource((IRI
                .create(getClass().getResource("/ontologies/mockfoaf.rdf")))));
        OWLOntologyID expectedKey = new OWLOntologyID(IRI.create("http://xmlns.com/foaf/0.1/"));
        assertTrue(ontologyProvider.hasOntology(expectedKey));
        sessionManager.destroySession(ses.getID());
    }

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Examples of org.apache.stanbol.ontologymanager.sources.owlapi.RootOntologySource

                if (cores.length > 0) {
                    OntologySpace corespc = sc.getCoreSpace();
                    corespc.tearDown();
                    for (int i = 0; i < cores.length; i++)
                        try {
                            corespc.addOntology(new RootOntologySource(IRI.create(cores[i])));
                        } catch (Exception ex) {
                            log.warn("Failed to import ontology " + cores[i], ex);
                            continue;
                        }
                }


                sc.setUp();
                registerScope(sc);
                sc.getCustomSpace().tearDown();
                for (String locationIri : customs) {
                    try {
                        OntologyInputSource<?> src = new RootOntologySource(IRI.create(locationIri));
                        sc.getCustomSpace().addOntology(src);
                        log.debug("Added ontology from location {}", locationIri);
                    } catch (UnmodifiableOntologyCollectorException e) {
                        log.error("An error occurred while trying to add the ontology from location: "
                                  + locationIri, e);

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Examples of org.apache.stanbol.ontologymanager.sources.owlapi.RootOntologySource

     *            used.
     * @throws OWLOntologyCreationException
     */
    public LibrarySource(IRI libraryID, RegistryManager registryManager, OWLOntologyManager ontologyManager) throws RegistryContentException,
                                                                                                            OWLOntologyCreationException {
        this(libraryID, registryManager, ontologyManager, new RootOntologySource(OWLManager
                .createOWLOntologyManager().createOntology(libraryID
                /* IRI.create(libraryID.toString().replace("#", "%23")) */)));
    }

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Examples of org.apache.stanbol.ontologymanager.sources.owlapi.RootOntologySource

        OWLOntologyManager mgr = OWLOntologyManagerFactory.createOWLOntologyManager(onManager
                .getOfflineConfiguration().getOntologySourceLocations().toArray(new IRI[0]));
        OWLDataFactory df = mgr.getOWLDataFactory();


        ont = mgr.createOntology(baseIri);
        inMemorySrc = new RootOntologySource(ont);
        // Let's state that Linus is a human being
        OWLClass cHuman = df.getOWLClass(IRI.create(baseIri + "/" + Constants.humanBeing));
        OWLIndividual iLinus = df.getOWLNamedIndividual(IRI.create(baseIri + "/" + Constants.linus));
        linusIsHuman = df.getOWLClassAssertionAxiom(cHuman, iLinus);
        mgr.applyChange(new AddAxiom(ont, linusIsHuman));


        ont2 = mgr.createOntology(baseIri2);
        minorSrc = new RootOntologySource(ont2);


        dropSrc = getLocalSource("/ontologies/droppedcharacters.owl", mgr);
        nonexSrc = getLocalSource("/ontologies/nonexistentcharacters.owl", mgr);
        minorSrc = new RootOntologySource(ont2);


    }

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Examples of org.apache.stanbol.ontologymanager.sources.owlapi.RootOntologySource

                } catch (Exception e) {
                    failed.add(url);
                }
                try {
                    // TODO replace with a Clerezza equivalent
                    ontologySpace.addOntology(new RootOntologySource(physicalIRI, sharedManager));
                    success.add(url);
                } catch (OWLOntologyCreationException e) {
                    log.error("Failed to load ontology from physical location " + physicalIRI
                              + " Continuing with next...", e);
                    failed.add(url);

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Examples of org.apache.stanbol.ontologymanager.sources.owlapi.RootOntologySource

            Origin<?> origin = ontologySource.getOrigin();
            Object ref = origin.getReference();
            log.debug("Origin wraps a {}", ref.getClass().getCanonicalName());
            if (ref instanceof IRI) try {
                log.debug("Deferring addition to physical IRI {} (if available).", ref);
                key = addOntology(new RootOntologySource((IRI) ref));
            } catch (OWLOntologyCreationException e) {
                throw new RuntimeException(e);
            }
            else if (ref instanceof UriRef) {
                log.debug("Deferring addition to stored Clerezza graph {} (if available).", ref);

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Examples of org.apache.stanbol.ontologymanager.sources.owlapi.RootOntologySource

    @Consumes(value = MediaType.TEXT_PLAIN)
    public Response manageOntology(String iri, @Context HttpHeaders headers) {
        ResponseBuilder rb;
        if (scope == null) rb = Response.status(NOT_FOUND);
        else try {
            OWLOntologyID key = scope.getCustomSpace().addOntology(new RootOntologySource(IRI.create(iri)));
            URI created = getCreatedResource(OntologyUtils.encode(key));
            rb = Response.created(created);
        } catch (UnmodifiableOntologyCollectorException e) {
            throw new WebApplicationException(e, FORBIDDEN);
        } catch (OWLOntologyCreationException e) {

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Examples of org.apache.stanbol.ontologymanager.sources.owlapi.RootOntologySource

            }


        // Then ontology sources
        if (coreOntologies != null) for (String ont : coreOntologies)
            if (ont != null && !ont.isEmpty()) try {
                srcs.add(new RootOntologySource(IRI.create(ont)));
            } catch (OWLOntologyCreationException e2) {
                // If this fails too, throw a bad request.
                throw new WebApplicationException(e2, BAD_REQUEST);
            }


        // Now the creation.
        try {
            // Expand core sources
            List<OntologyInputSource<?>> expanded = new ArrayList<OntologyInputSource<?>>();
            for (OntologyInputSource<?> coreSrc : srcs)
                if (coreSrc != null) {
                    if (coreSrc instanceof SetInputSource) {
                        for (Object o : ((SetInputSource<?>) coreSrc).getOntologies()) {
                            OntologyInputSource<?> src = null;
                            if (o instanceof OWLOntology) src = new RootOntologySource((OWLOntology) o);
                            else if (o instanceof TripleCollection) src = new GraphSource(
                                    (TripleCollection) o);
                            if (src != null) expanded.add(src);
                        }
                    } else expanded.add(coreSrc); // Must be denoting a single ontology

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Examples of org.apache.stanbol.ontologymanager.sources.owlapi.RootOntologySource

    @POST
    @Consumes(value = MediaType.TEXT_PLAIN)
    public Response manageOntology(String iri, @Context HttpHeaders headers) {
        if (session == null) return Response.status(NOT_FOUND).build();
        try {
            session.addOntology(new RootOntologySource(IRI.create(iri)));
        } catch (UnmodifiableOntologyCollectorException e) {
            throw new WebApplicationException(e, FORBIDDEN);
        } catch (OWLOntologyCreationException e) {
            throw new WebApplicationException(e, INTERNAL_SERVER_ERROR);
        }

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Examples of org.apache.stanbol.ontologymanager.sources.owlapi.RootOntologySource

                        continue;
                    }
                log.debug("No more formats to try.");
            } else if (location != null) {
                try {
                    src = new RootOntologySource(location);
                } catch (Exception e) {
                    log.error("Failed to load ontology from " + location, e);
                    throw new WebApplicationException(e, BAD_REQUEST);
                }
            } else if (library != null) { // This comes last, since it will most likely have a value.

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