Examples of org.apache.stanbol.ontologymanager.sources.owlapi.RootOntologySource

Package org.apache.stanbol.ontologymanager.sources.owlapi

Examples of org.apache.stanbol.ontologymanager.sources.owlapi.RootOntologySource

org.apache.stanbol.ontologymanager.sources.owlapi.RootOntologySource
An input source that provides the supplied OWL ontology straight away or from its physical resource. The physical IRI is either obtained from the default document IRI in the ontology, or supplied manually using the appropriate constructor (e.g. retrieved from the ontology manager that actually loaded the ontology).

Note that, no matter what constructor is used, the expected behavior of {@link OntologyInputSource}consumers remains the same, i.e. the root ontology is checked first, and then its physical origin. @author alexdma


        if (rootSrc instanceof OntologySpaceSource) {
            OntologySpace spc = ((OntologySpaceSource) rootSrc).asOntologySpace();
            for (OWLOntology o : subtrees)
                try {
                    spc.addOntology(new RootOntologySource(o));
                } catch (UnmodifiableOntologyCollectorException e) {
                    logger.error("Cannot add ontology {} to unmodifiable space {}", o, spc);
                    continue;
                }
        }

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    public static OWLOntology buildImportTree(Set<OWLOntology> subtrees) throws OWLOntologyCreationException {
        return buildImportTree(subtrees, OWLManager.createOWLOntologyManager());
    }


    public static OWLOntology buildImportTree(Set<OWLOntology> subtrees, OWLOntologyManager mgr) throws OWLOntologyCreationException {
        return buildImportTree(new RootOntologySource(mgr.createOntology()), subtrees, mgr);
    }

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     * deletion of that ontology in general.
     */
    @Test
    public void storedOntologyOutlivesScope() throws Exception {
        String ephemeralScopeId = "CaducousScope";
        OntologyInputSource<OWLOntology> ois = new RootOntologySource(IRI.create(getClass().getResource(
            "/ontologies/nonexistentcharacters.owl")));
        OWLOntologyID ontologyId = ois.getRootOntology().getOntologyID();
        Scope scope = onManager.createOntologyScope(ephemeralScopeId);
        // Initially, the ontology is not there
        assertFalse(ontologyProvider.hasOntology(ontologyId));
        // Once added, the ontology is there
        scope.getCustomSpace().addOntology(ois);

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    private static OntologyInputSource<?> src1 = null, src2 = null;


    @BeforeClass
    public static void setup() throws Exception {
        OWLOntologyManager mgr = OWLOntologyManagerFactory.createOWLOntologyManager(null);
        src1 = new RootOntologySource(mgr.createOntology(baseIri));
        src2 = new RootOntologySource(mgr.createOntology(baseIri2));
        reset();
    }

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    }


    // @Test
    public void zombieSessionClearsContents() throws Exception {
        Session ses = sessionManager.createSession();
        ses.addOntology(new RootOntologySource((IRI
                .create(getClass().getResource("/ontologies/mockfoaf.rdf")))));
        OWLOntologyID expectedKey = new OWLOntologyID(IRI.create("http://xmlns.com/foaf/0.1/"));
        assertTrue(ontologyProvider.hasOntology(expectedKey));
        sessionManager.destroySession(ses.getID());
    }

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                if (cores.length > 0) {
                    OntologySpace corespc = sc.getCoreSpace();
                    corespc.tearDown();
                    for (int i = 0; i < cores.length; i++)
                        try {
                            corespc.addOntology(new RootOntologySource(IRI.create(cores[i])));
                        } catch (Exception ex) {
                            log.warn("Failed to import ontology " + cores[i], ex);
                            continue;
                        }
                }


                sc.setUp();
                registerScope(sc);
                sc.getCustomSpace().tearDown();
                for (String locationIri : customs) {
                    try {
                        OntologyInputSource<?> src = new RootOntologySource(IRI.create(locationIri));
                        sc.getCustomSpace().addOntology(src);
                        log.debug("Added ontology from location {}", locationIri);
                    } catch (UnmodifiableOntologyCollectorException e) {
                        log.error("An error occurred while trying to add the ontology from location: "
                                  + locationIri, e);

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     *            used.
     * @throws OWLOntologyCreationException
     */
    public LibrarySource(IRI libraryID, RegistryManager registryManager, OWLOntologyManager ontologyManager) throws RegistryContentException,
                                                                                                            OWLOntologyCreationException {
        this(libraryID, registryManager, ontologyManager, new RootOntologySource(OWLManager
                .createOWLOntologyManager().createOntology(libraryID
                /* IRI.create(libraryID.toString().replace("#", "%23")) */)));
    }

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        OWLOntologyManager mgr = OWLOntologyManagerFactory.createOWLOntologyManager(onManager
                .getOfflineConfiguration().getOntologySourceLocations().toArray(new IRI[0]));
        OWLDataFactory df = mgr.getOWLDataFactory();


        ont = mgr.createOntology(baseIri);
        inMemorySrc = new RootOntologySource(ont);
        // Let's state that Linus is a human being
        OWLClass cHuman = df.getOWLClass(IRI.create(baseIri + "/" + Constants.humanBeing));
        OWLIndividual iLinus = df.getOWLNamedIndividual(IRI.create(baseIri + "/" + Constants.linus));
        linusIsHuman = df.getOWLClassAssertionAxiom(cHuman, iLinus);
        mgr.applyChange(new AddAxiom(ont, linusIsHuman));


        ont2 = mgr.createOntology(baseIri2);
        minorSrc = new RootOntologySource(ont2);


        dropSrc = getLocalSource("/ontologies/droppedcharacters.owl", mgr);
        nonexSrc = getLocalSource("/ontologies/nonexistentcharacters.owl", mgr);
        minorSrc = new RootOntologySource(ont2);


    }

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                } catch (Exception e) {
                    failed.add(url);
                }
                try {
                    // TODO replace with a Clerezza equivalent
                    ontologySpace.addOntology(new RootOntologySource(physicalIRI, sharedManager));
                    success.add(url);
                } catch (OWLOntologyCreationException e) {
                    log.error("Failed to load ontology from physical location " + physicalIRI
                              + " Continuing with next...", e);
                    failed.add(url);

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            Origin<?> origin = ontologySource.getOrigin();
            Object ref = origin.getReference();
            log.debug("Origin wraps a {}", ref.getClass().getCanonicalName());
            if (ref instanceof IRI) try {
                log.debug("Deferring addition to physical IRI {} (if available).", ref);
                key = addOntology(new RootOntologySource((IRI) ref));
            } catch (OWLOntologyCreationException e) {
                throw new RuntimeException(e);
            }
            else if (ref instanceof UriRef) {
                log.debug("Deferring addition to stored Clerezza graph {} (if available).", ref);

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org.apache.stanbol.ontologymanager.multiplexer.clerezza.impl.AbstractOntologyCollectorImpl

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org.apache.stanbol.ontologymanager.multiplexer.clerezza.scope.TestOntologySpaces

org.apache.stanbol.ontologymanager.multiplexer.clerezza.session.TestSessions

org.apache.stanbol.ontologymanager.registry.io.LibrarySource

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org.apache.stanbol.ontologymanager.web.resources.ScopeResource

org.apache.stanbol.ontologymanager.web.resources.SessionResource

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