Package gem

Examples of gem.PlotForTissue$Group

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      "Method of processing: sequential|mapreduce").withShortName("method").create();
    Option encodingOpt = obuilder.withLongName("encoding").withArgument(
      abuilder.withName("encoding").withMinimum(1).withMaximum(1).create()).withDescription(
      "(Optional) The file encoding.  Default value: UTF-8").withShortName("e").create();
   
    Group group = gbuilder.withName("Options").withOption(minSupportOpt).withOption(inputDirOpt).withOption(
      outputOpt).withOption(maxHeapSizeOpt).withOption(numGroupsOpt).withOption(methodOpt).withOption(
      encodingOpt).withOption(helpOpt).withOption(treeCacheOpt).withOption(recordSplitterOpt).create();
    try {
      Parser parser = new Parser();
      parser.setGroup(group);
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        .withArgument(abuilder.withName("numparts").withMinimum(1).withMinimum(1).create()).withDescription(
          "Number of partitions to create").create();
    Option helpOpt = obuilder.withLongName("help").withDescription("Print out help").withShortName("h")
        .create();
   
    Group group = gbuilder.withName("Options").withOption(dataOpt).withOption(outputOpt).withOption(
      datasetOpt).withOption(partitionsOpt).withOption(helpOpt).create();
   
    try {
      Parser parser = new Parser();
      parser.setGroup(group);
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    Option dataSourceOpt = obuilder.withLongName("dataSource").withRequired(true).withArgument(
      abuilder.withName("dataSource").withMinimum(1).withMaximum(1).create()).withDescription(
      "Location of model: hdfs|hbase").withShortName("source").create();
   
    Group options = gbuilder.withName("Options").withOption(pathOpt).withOption(classifyOpt).withOption(
      encodingOpt).withOption(analyzerOpt).withOption(defaultCatOpt).withOption(gramSizeOpt).withOption(
      typeOpt).withOption(dataSourceOpt).create();
   
    Parser parser = new Parser();
    parser.setGroup(options);
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                                              .withOption(helpOpt)
                                              .withOption(outOpt)
                                              .withOption(inMemOpt)
                                              .withOption(errorOpt)
                                              .withOption(minEigenValOpt);
    Group group = gBuilder.create();

    Map<String,String> argMap = new HashMap<String,String>();

    CommandLine cmdLine;
    try {
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    for (Option opt : extraOpts) {
      gBuilder = gBuilder.withOption(opt);
    }
   
    Group group = gBuilder.create();
   
    CommandLine cmdLine;
    try {
      Parser parser = new Parser();
      parser.setGroup(group);
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    Option overwriteOutput = obuilder.withLongName("overwrite").withRequired(false).withDescription(
      "If set, overwrite the output directory").withShortName("w").create();
    Option helpOpt = obuilder.withLongName("help").withDescription("Print out help").withShortName("h")
        .create();
   
    Group group = gbuilder.withName("Options").withOption(minSupportOpt).withOption(analyzerNameOpt)
        .withOption(chunkSizeOpt).withOption(outputDirOpt).withOption(inputDirOpt).withOption(minDFOpt)
        .withOption(maxDFPercentOpt).withOption(weightOpt).withOption(powerOpt).withOption(minLLROpt)
        .withOption(numReduceTasksOpt).withOption(maxNGramSizeOpt).withOption(overwriteOutput).withOption(
          helpOpt).withOption(sequentialAccessVectorOpt).create();
    try {
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      "Type of classifier: bayes|cbayes. Default: bayes").withShortName("type").create();
    Option dataSourceOpt = obuilder.withLongName("dataSource").withRequired(true).withArgument(
      abuilder.withName("dataSource").withMinimum(1).withMaximum(1).create()).withDescription(
      "Location of model: hdfs|hbase. Default Value: hdfs").withShortName("source").create();
   
    Group group = gbuilder.withName("Options").withOption(gramSizeOpt).withOption(helpOpt).withOption(
      inputDirOpt).withOption(outputOpt).withOption(typeOpt).withOption(dataSourceOpt).withOption(alphaOpt)
        .create();
    try {
      Parser parser = new Parser();
     
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    Option methodOpt = obuilder.withLongName("method").withRequired(false).withArgument(
      abuilder.withName("method").withMinimum(1).withMaximum(1).create()).withDescription(
      "Method of Classification: sequential|mapreduce. Default Value: sequential").withShortName("method")
        .create();
   
    Group group = gbuilder.withName("Options").withOption(defaultCatOpt).withOption(dirOpt).withOption(
      encodingOpt).withOption(gramSizeOpt).withOption(pathOpt).withOption(typeOpt).withOption(dataSourceOpt)
        .withOption(helpOpt).withOption(methodOpt).withOption(verboseOutputOpt).withOption(alphaOpt).create();
   
    try {
      Parser parser = new Parser();
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      "t2").create();
   
    Option helpOpt = obuilder.withLongName("help").withDescription("Print out help").withShortName("h")
        .create();
   
    Group group = gbuilder.withName("Options").withOption(inputOpt).withOption(outputOpt).withOption(
      measureClassOpt).withOption(vectorClassOpt).withOption(t1Opt).withOption(t2Opt).withOption(helpOpt)
        .create();
   
    try {
      Parser parser = new Parser();
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    Option numRedOpt = obuilder.withLongName("maxRed").withRequired(true).withShortName("r").withArgument(
      abuilder.withName("maxRed").withMinimum(1).withMaximum(1).create()).withDescription(
      "The number of reduce tasks.").create();
   
    Group group = gbuilder.withName("Options").withOption(inputOpt).withOption(outputOpt)
        .withOption(modelOpt).withOption(prototypeOpt).withOption(sizeOpt).withOption(maxIterOpt).withOption(
          mOpt).withOption(topicsOpt).withOption(helpOpt).withOption(numRedOpt).create();
   
    try {
      Parser parser = new Parser();
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Related Classes of gem.PlotForTissue$Group

  • ca.uhn.fhir.model.dstu.composite.ResourceReferenceDt
  • ca.uhn.fhir.model.primitive.StringDt
  • com.cloud.bridge.service.controller.s3.S3SerializableServiceImplementation
  • com.cloud.bridge.service.S3SoapServiceImpl
  • com.digitalpebble.behemoth.mahout.SparseVectorsFromBehemoth
  • com.digitalpebble.behemoth.tika.TikaDriver
  • com.sun.xml.bind.v2.schemagen.xmlschema.Particle
  • com.sun.xml.internal.bind.v2.schemagen.xmlschema.Particle
  • edu.isi.karma.mapreduce.function.CreateJSONFromSequenceFile
  • edu.isi.karma.mapreduce.function.CreateSequenceFile
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