Examples of AttributeColumn

Examples of org.gephi.data.attributes.api.AttributeColumn

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                        otherRow.setValue(column.getIndex(), row.getValue(column.getIndex()));
                    }
                }
            }
        } else {
            AttributeColumn column;
            AttributeValue[] values = attributeRow.getValues();
            for (int i = 0; i < values.length; i++) {
                column = values[i].getColumn();
                //Copy all except id and computed attributes:
                if (canChangeColumnData(column)) {
                    for (Attributes otherRow : otherRows) {
                        otherRow.setValue(column.getIndex(), row.getValue(column.getIndex()));
                    }
                }
            }
        }
    }
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Examples of org.gephi.data.attributes.api.AttributeColumn

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        return newColumn;
    }

    /*************Private methods:*************/
    private AttributeColumn getTimeIntervalColumn(AttributeTable table) {
        AttributeColumn column = table.getColumn(DynamicModel.TIMEINTERVAL_COLUMN);
        if (column == null) {
            column = table.addColumn(DynamicModel.TIMEINTERVAL_COLUMN, "Time Interval", AttributeType.TIME_INTERVAL, AttributeOrigin.PROPERTY, null);
        }
        return column;
    }
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Examples of org.gephi.data.attributes.api.AttributeColumn

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            target = edgeCheckBoxs;
        }
        contentPanel.removeAll();
        contentPanel.setLayout(new MigLayout("", "[pref!]"));
        for (int i = 0; i < availableColumns.size(); i++) {
            AttributeColumn column = availableColumns.get(i);
            AttributesCheckBox c = new AttributesCheckBox(column, selectedColumns.contains(column));
            target[i] = c;
            contentPanel.add(c.getCheckBox(), "wrap");
        }
        contentPanel.revalidate();
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Examples of org.gephi.data.attributes.api.AttributeColumn

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            //Add AttributeValues manipulators submenu:
            AttributeRow row = (AttributeRow) clickedEdge.getEdgeData().getAttributes();
            int realColumnIndex = table.convertColumnIndexToModel(table.columnAtPoint(p)) - FAKE_COLUMNS_COUNT;//Get real attribute column index not counting fake columns.
            if (realColumnIndex >= 0) {
                AttributeColumn column = showingColumns[realColumnIndex];
                if (column != null) {
                    contextMenu.add(PopupMenuUtils.createSubMenuFromRowColumn(row, column));
                }
            }
            return contextMenu;
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Examples of org.gephi.data.attributes.api.AttributeColumn

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        hgraph.readUnlock();
    }

    private double finalQ(int[] struct, double[] degrees, HierarchicalUndirectedGraph hgraph, AttributeModel attributeModel) {
        AttributeTable nodeTable = attributeModel.getNodeTable();
        AttributeColumn modCol = nodeTable.getColumn(MODULARITY_CLASS);
        if (modCol == null) {
            modCol = nodeTable.addColumn(MODULARITY_CLASS, "Modularity Class", AttributeType.INT, AttributeOrigin.COMPUTED, new Integer(0));
        }

        double res = 0;
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Examples of org.gephi.data.attributes.api.AttributeColumn

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        if (cancel) {
            return;
        }
        xmlWriter.writeStartElement(NODES);

        AttributeColumn dynamicCol = dynamicCol = attributeModel.getNodeTable().getColumn(DynamicModel.TIMEINTERVAL_COLUMN);

        NodeIterable nodeIterable = exportHierarchy ? graph.getNodesTree() : graph.getNodes();
        for (Node node : nodeIterable) {
            xmlWriter.writeStartElement(NODE);

            String id = node.getNodeData().getId();
            xmlWriter.writeAttribute(NODE_ID, id);
            if (node.getNodeData().getLabel() != null && !node.getNodeData().getLabel().isEmpty()) {
                xmlWriter.writeAttribute(NODE_LABEL, node.getNodeData().getLabel());
            }

            if (exportHierarchy) {
                Node parent = graph.getParent(node);
                if (parent != null) {
                    xmlWriter.writeAttribute(NODE_PID, parent.getNodeData().getId());
                }
            }

            if (exportDynamic && dynamicCol != null && visibleInterval != null) {
                TimeInterval timeInterval = (TimeInterval) node.getNodeData().getAttributes().getValue(dynamicCol.getIndex());
                if (timeInterval != null) {
                    writeTimeInterval(xmlWriter, timeInterval);
                }
            }
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Examples of org.gephi.data.attributes.api.AttributeColumn

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    }

    private void writeAttValues(XMLStreamWriter xmlWriter, AttributeRow row, TimeInterval visibleInterval) throws Exception {
        xmlWriter.writeStartElement(ATTVALUES);
        for (AttributeValue val : row.getValues()) {
            AttributeColumn col = val.getColumn();
            if (!col.getOrigin().equals(AttributeOrigin.PROPERTY)
                    || (exportDynamic && col.getOrigin().equals(AttributeOrigin.PROPERTY) && col.getIndex() == PropertiesColumn.EDGE_WEIGHT.getIndex())) {
                AttributeType type = col.getType();
                if (type.isDynamicType()) {
                    DynamicType dynamicValue = (DynamicType) val.getValue();
                    if (dynamicValue != null && visibleInterval != null && exportDynamic) {
                        List<Interval<?>> intervals = dynamicValue.getIntervals(visibleInterval.getLow(), visibleInterval.getHigh());
                        for (Interval<?> interval : intervals) {
                            Object value = interval.getValue();
                            if (value != null) {
                                xmlWriter.writeStartElement(ATTVALUE);
                                xmlWriter.writeAttribute(ATTVALUE_FOR, col.getId());
                                xmlWriter.writeAttribute(ATTVALUE_VALUE, value.toString());
                                if (!Double.isInfinite(interval.getLow())) {
                                    String intervalLow = formatTime(interval.getLow());
                                    xmlWriter.writeAttribute(interval.isLowExcluded() ? START_OPEN : START, intervalLow);
                                }
                                if (!Double.isInfinite(interval.getHigh())) {
                                    String intervalHigh = formatTime(interval.getHigh());
                                    xmlWriter.writeAttribute(interval.isHighExcluded() ? END_OPEN : END, intervalHigh);
                                }
                                xmlWriter.writeEndElement();
                            }
                        }
                    } else if (dynamicValue != null) {
                        TimeInterval interval = visibleInterval;
                        if (interval == null) {
                            interval = new TimeInterval();
                        }
                        Object value = DynamicUtilities.getDynamicValue(dynamicValue, interval.getLow(), interval.getHigh());
                        if (value != null) {
                            xmlWriter.writeStartElement(ATTVALUE);
                            xmlWriter.writeAttribute(ATTVALUE_FOR, val.getColumn().getId());
                            xmlWriter.writeAttribute(ATTVALUE_VALUE, value.toString());
                            xmlWriter.writeEndElement();
                        }
                    }
                } else {
                    if (val.getValue() != null) {
                        xmlWriter.writeStartElement(ATTVALUE);
                        xmlWriter.writeAttribute(ATTVALUE_FOR, col.getId());
                        xmlWriter.writeAttribute(ATTVALUE_VALUE, val.getValue().toString());
                        xmlWriter.writeEndElement();
                    }
                }
            }
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Examples of org.gephi.data.attributes.api.AttributeColumn

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        if (cancel) {
            return;
        }
        xmlWriter.writeStartElement(EDGES);

        AttributeColumn dynamicCol = dynamicCol = attributeModel.getEdgeTable().getColumn(DynamicModel.TIMEINTERVAL_COLUMN);

        EdgeIterable edgeIterable = exportHierarchy ? graph.getEdgesTree() : graph.getEdgesAndMetaEdges();
        for (Edge edge : edgeIterable) {
            xmlWriter.writeStartElement(EDGE);

            if (edge.getEdgeData().getId() != null && !edge.getEdgeData().getId().equals(Integer.toString(edge.getId()))) {
                xmlWriter.writeAttribute(EDGE_ID, edge.getEdgeData().getId());
            }
            xmlWriter.writeAttribute(EDGE_SOURCE, edge.getSource().getNodeData().getId());
            xmlWriter.writeAttribute(EDGE_TARGET, edge.getTarget().getNodeData().getId());

            if (edge.isDirected() && graphModel.isMixed()) {
                xmlWriter.writeAttribute(EDGE_TYPE, "directed");
            } else if (!edge.isDirected() && graphModel.isMixed()) {
                xmlWriter.writeAttribute(EDGE_TYPE, "undirected");
            }

            String label = edge.getEdgeData().getLabel();
            if (label != null && !label.isEmpty()) {
                xmlWriter.writeAttribute(EDGE_LABEL, label);
            }

            float weight = edge.getWeight();
            if (weight != 1f) {
                xmlWriter.writeAttribute(EDGE_WEIGHT, "" + weight);
            }

            if (exportDynamic && dynamicCol != null && visibleInterval != null) {
                TimeInterval timeInterval = (TimeInterval) edge.getEdgeData().getAttributes().getValue(dynamicCol.getIndex());
                if (timeInterval != null) {
                    writeTimeInterval(xmlWriter, timeInterval);
                }
            }
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Examples of org.gephi.data.attributes.api.AttributeColumn

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        Edge e2 = graphModel.factory().newEdge(n2, n4, 3f, true);
        graph.addEdge(e2);
        Edge e3 = graphModel.factory().newEdge(n2, n1, 1f, true);
        graph.addEdge(e3);

        AttributeColumn nodeCol1 = attributeModel.getNodeTable().addColumn("col1", "Column 1", AttributeType.STRING, AttributeOrigin.DATA, "default value col1");
        AttributeColumn nodeCol2 = attributeModel.getNodeTable().addColumn("col2 listint", AttributeType.LIST_INTEGER);
        attributeModel.getNodeTable().addColumn("col3 listchar", AttributeType.LIST_CHARACTER);
        attributeModel.getNodeTable().addColumn("col4 int", AttributeType.INT);
        attributeModel.getNodeTable().addColumn("col5 liststring", AttributeType.LIST_STRING);
        AttributeColumn nodeTimeCol = attributeModel.getNodeTable().addColumn(DynamicModel.TIMEINTERVAL_COLUMN, AttributeType.TIME_INTERVAL, AttributeOrigin.PROPERTY);

        AttributeColumn edgeCol1 = attributeModel.getEdgeTable().addColumn("col1", AttributeType.DYNAMIC_INT);
        AttributeColumn edgeCol2 = attributeModel.getEdgeTable().addColumn("col2", AttributeType.DYNAMIC_STRING);

        n1.getNodeData().getAttributes().setValue(nodeCol1.getIndex(), "test");
        n1.getNodeData().getAttributes().setValue(nodeCol2.getIndex(), new IntegerList(new int[]{1, 2, 3, 4}));

        n1.getNodeData().getAttributes().setValue(nodeTimeCol.getIndex(), new TimeInterval(1, 5));
        List<Interval> intervalList = new ArrayList<Interval>();
        intervalList.add(new Interval(1.0, 2.0));
        intervalList.add(new Interval(3.0, 4.0));
        n2.getNodeData().getAttributes().setValue(nodeTimeCol.getIndex(), new TimeInterval(intervalList));

        DynamicInteger dynamicInteger = new DynamicInteger(new Interval(4., 10., 100));
        e1.getEdgeData().getAttributes().setValue(edgeCol1.getIndex(), dynamicInteger);

        List<Interval<String>> stringIntervalList = new ArrayList<Interval<String>>();
        stringIntervalList.add(new Interval<String>(Double.NEGATIVE_INFINITY,1.,"a"));
        stringIntervalList.add(new Interval<String>(2.,3.,"b"));
        stringIntervalList.add(new Interval<String>(4.,Double.POSITIVE_INFINITY,"c"));
        DynamicString dynamicString = new DynamicString(stringIntervalList);
        e3.getEdgeData().getAttributes().setValue(edgeCol2.getIndex(), dynamicString);

        exporter = new ExporterGEXF();
        exporter.setWorkspace(workspace);
    }
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Examples of org.gephi.data.attributes.api.AttributeColumn

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        if (table == null || columnsToMerge == null) {
            throw new IllegalArgumentException("Table or columns can't be null");
        }

        AttributeColumnsController ac = Lookup.getDefault().lookup(AttributeColumnsController.class);
        AttributeColumn newColumn;
        newColumn = ac.addAttributeColumn(table, newColumnTitle, newColumnType != null ? newColumnType : AttributeType.STRING);//Create as STRING column by default. Then it can be duplicated to other type.
        if (newColumn == null) {
            return null;
        }

        final int newColumnIndex = newColumn.getIndex();

        if (separator == null) {
            separator = "";
        }
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