Examples of showNumberAndChart()

Examples of no.uib.jsparklines.renderers.JSparklinesArrayListBarChartTableCellRenderer.showNumberAndChart()

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        sparklineColors.add(peptideShakerGUI.getUtilitiesUserPreferences().getSparklineColorDoubtful());
        sparklineColors.add(nonValidatedColor);
        sparklineColors.add(peptideShakerGUI.getUtilitiesUserPreferences().getSparklineColorNotFound());

        JSparklinesArrayListBarChartTableCellRenderer coverageCellRendered = new JSparklinesArrayListBarChartTableCellRenderer(PlotOrientation.HORIZONTAL, 100.0, sparklineColors, JSparklinesArrayListBarChartTableCellRenderer.ValueDisplayType.sumExceptLastNumber);
        coverageCellRendered.showNumberAndChart(true, TableProperties.getLabelWidth(), new DecimalFormat("0.00"));
        proteinTable.getColumn("Coverage").setCellRenderer(coverageCellRendered);

        // make sure that the user is made aware that the tool is doing something during sorting of the protein table
        proteinTable.getRowSorter().addRowSorterListener(new RowSorterListener() {
            @Override
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Examples of no.uib.jsparklines.renderers.JSparklinesArrayListBarChartTableCellRenderer.showNumberAndChart()

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        sparklineColors.add(sparklineColorDoubtful);
        sparklineColors.add(nonValidatedColor);
        sparklineColors.add(sparklineColorNotFound);

        JSparklinesArrayListBarChartTableCellRenderer coverageCellRendered = new JSparklinesArrayListBarChartTableCellRenderer(PlotOrientation.HORIZONTAL, 100.0, sparklineColors, JSparklinesArrayListBarChartTableCellRenderer.ValueDisplayType.sumExceptLastNumber);
        coverageCellRendered.showNumberAndChart(true, TableProperties.getLabelWidth(), new DecimalFormat("0.00"));
        proteinTable.getColumn("Coverage").setCellRenderer(coverageCellRendered);

        JSparklinesArrayListBarChartTableCellRenderer peptidesCellRenderer = new JSparklinesArrayListBarChartTableCellRenderer(PlotOrientation.HORIZONTAL, 100.0, sparklineColors, JSparklinesArrayListBarChartTableCellRenderer.ValueDisplayType.sumOfNumbers);
        peptidesCellRenderer.showNumberAndChart(true, TableProperties.getLabelWidth(), new DecimalFormat("0"));
        proteinTable.getColumn("#Peptides").setCellRenderer(peptidesCellRenderer);
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Examples of no.uib.jsparklines.renderers.JSparklinesArrayListBarChartTableCellRenderer.showNumberAndChart()

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        JSparklinesArrayListBarChartTableCellRenderer coverageCellRendered = new JSparklinesArrayListBarChartTableCellRenderer(PlotOrientation.HORIZONTAL, 100.0, sparklineColors, JSparklinesArrayListBarChartTableCellRenderer.ValueDisplayType.sumExceptLastNumber);
        coverageCellRendered.showNumberAndChart(true, TableProperties.getLabelWidth(), new DecimalFormat("0.00"));
        proteinTable.getColumn("Coverage").setCellRenderer(coverageCellRendered);

        JSparklinesArrayListBarChartTableCellRenderer peptidesCellRenderer = new JSparklinesArrayListBarChartTableCellRenderer(PlotOrientation.HORIZONTAL, 100.0, sparklineColors, JSparklinesArrayListBarChartTableCellRenderer.ValueDisplayType.sumOfNumbers);
        peptidesCellRenderer.showNumberAndChart(true, TableProperties.getLabelWidth(), new DecimalFormat("0"));
        proteinTable.getColumn("#Peptides").setCellRenderer(peptidesCellRenderer);

        JSparklinesArrayListBarChartTableCellRenderer spectraCellRenderer = new JSparklinesArrayListBarChartTableCellRenderer(PlotOrientation.HORIZONTAL, 100.0, sparklineColors, JSparklinesArrayListBarChartTableCellRenderer.ValueDisplayType.sumOfNumbers);
        spectraCellRenderer.showNumberAndChart(true, TableProperties.getLabelWidth(), new DecimalFormat("0"));
        proteinTable.getColumn("#Spectra").setCellRenderer(spectraCellRenderer);
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Examples of no.uib.jsparklines.renderers.JSparklinesArrayListBarChartTableCellRenderer.showNumberAndChart()

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        JSparklinesArrayListBarChartTableCellRenderer peptidesCellRenderer = new JSparklinesArrayListBarChartTableCellRenderer(PlotOrientation.HORIZONTAL, 100.0, sparklineColors, JSparklinesArrayListBarChartTableCellRenderer.ValueDisplayType.sumOfNumbers);
        peptidesCellRenderer.showNumberAndChart(true, TableProperties.getLabelWidth(), new DecimalFormat("0"));
        proteinTable.getColumn("#Peptides").setCellRenderer(peptidesCellRenderer);

        JSparklinesArrayListBarChartTableCellRenderer spectraCellRenderer = new JSparklinesArrayListBarChartTableCellRenderer(PlotOrientation.HORIZONTAL, 100.0, sparklineColors, JSparklinesArrayListBarChartTableCellRenderer.ValueDisplayType.sumOfNumbers);
        spectraCellRenderer.showNumberAndChart(true, TableProperties.getLabelWidth(), new DecimalFormat("0"));
        proteinTable.getColumn("#Spectra").setCellRenderer(spectraCellRenderer);

        JSparklinesBarChartTableCellRenderer spectrumCountingCellRenderer = new JSparklinesBarChartTableCellRenderer(PlotOrientation.HORIZONTAL, 10.0, sparklineColor);
        spectrumCountingCellRenderer.showNumberAndChart(true, TableProperties.getLabelWidth());
        proteinTable.getColumn("MS2 Quant.").setCellRenderer(spectrumCountingCellRenderer);
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Examples of no.uib.jsparklines.renderers.JSparklinesBarChartTableCellRenderer.showNumberAndChart()

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        JSparklinesArrayListBarChartTableCellRenderer spectraCellRenderer = new JSparklinesArrayListBarChartTableCellRenderer(PlotOrientation.HORIZONTAL, 100.0, sparklineColors, JSparklinesArrayListBarChartTableCellRenderer.ValueDisplayType.sumOfNumbers);
        spectraCellRenderer.showNumberAndChart(true, TableProperties.getLabelWidth(), new DecimalFormat("0"));
        proteinTable.getColumn("#Spectra").setCellRenderer(spectraCellRenderer);

        JSparklinesBarChartTableCellRenderer spectrumCountingCellRenderer = new JSparklinesBarChartTableCellRenderer(PlotOrientation.HORIZONTAL, 10.0, sparklineColor);
        spectrumCountingCellRenderer.showNumberAndChart(true, TableProperties.getLabelWidth());
        proteinTable.getColumn("MS2 Quant.").setCellRenderer(spectrumCountingCellRenderer);

        JSparklinesBarChartTableCellRenderer mwCellRenderer = new JSparklinesBarChartTableCellRenderer(PlotOrientation.HORIZONTAL, 10.0, sparklineColor);
        mwCellRenderer.showNumberAndChart(true, TableProperties.getLabelWidth());
        proteinTable.getColumn("MW").setCellRenderer(mwCellRenderer);
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Examples of no.uib.jsparklines.renderers.JSparklinesBarChartTableCellRenderer.showNumberAndChart()

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        JSparklinesBarChartTableCellRenderer spectrumCountingCellRenderer = new JSparklinesBarChartTableCellRenderer(PlotOrientation.HORIZONTAL, 10.0, sparklineColor);
        spectrumCountingCellRenderer.showNumberAndChart(true, TableProperties.getLabelWidth());
        proteinTable.getColumn("MS2 Quant.").setCellRenderer(spectrumCountingCellRenderer);

        JSparklinesBarChartTableCellRenderer mwCellRenderer = new JSparklinesBarChartTableCellRenderer(PlotOrientation.HORIZONTAL, 10.0, sparklineColor);
        mwCellRenderer.showNumberAndChart(true, TableProperties.getLabelWidth());
        proteinTable.getColumn("MW").setCellRenderer(mwCellRenderer);

        proteinTable.getColumn("Chr").setCellRenderer(new ChromosomeTableCellRenderer());

        try {
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Examples of no.uib.jsparklines.renderers.JSparklinesIntervalChartTableCellRenderer.showNumberAndChart()

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            if (retentionTimeValues) {
                JSparklinesIntervalChartTableCellRenderer rtCellRenderer = new JSparklinesIntervalChartTableCellRenderer(
                        PlotOrientation.HORIZONTAL, SpectrumFactory.getInstance().getMinRT(), SpectrumFactory.getInstance().getMaxRT(), SpectrumFactory.getInstance().getMaxRT() / 50,
                        peptideShakerGUI.getSparklineColor(), peptideShakerGUI.getSparklineColor());
                relatedPsmsTable.getColumn("RT").setCellRenderer(rtCellRenderer);
                rtCellRenderer.showNumberAndChart(true, TableProperties.getLabelWidth() + 5);
                ((JSparklinesIntervalChartTableCellRenderer) relatedPsmsTable.getColumn("RT").getCellRenderer()).showReferenceLine(true, 0.02, java.awt.Color.BLACK);
            }
        } catch (Exception e) {
            peptideShakerGUI.catchException(e);
            e.printStackTrace();
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