Examples of org.apache.commons.math.stat.Frequency.addValue()

Class org.apache.commons.math.stat.Frequency

Examples of org.apache.commons.math.stat.Frequency.addValue()

org.apache.commons.math.stat.Frequency.addValue()
Adds 1 to the frequency count for v.
If other objects have already been added to this Frequency, v must be comparable to those that have already been added.
@param v the value to add. @throws IllegalArgumentException if v is not Comparable,or is not comparable with previous entries @deprecated use {@link #addValue(Comparable)} instead

            hexString = randomData.nextHexString(100);
            if (hexString.length() != 100) {
                fail("incorrect length for generated string");
            }
            for (int j = 0; j < hexString.length(); j++) {
                f.addValue(hexString.substring(j,j+1));
            }
        }
        double[] expected = new double[16];
        long[] observed = new long[16];
        for (int i = 0; i < 16; i++) {

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            hexString = randomData.nextSecureHexString(100);
            if (hexString.length() != 100) {
                fail("incorrect length for generated string");
            }
            for (int j = 0; j < hexString.length(); j++) {
                f.addValue(hexString.substring(j,j+1));
            }
        }
        double[] expected = new double[16];
        long[] observed = new long[16];
        for (int i = 0; i < 16; i++) {

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        Frequency freq = new Frequency();
        int value = 0;
        for (int i=0;i<smallSampleSize;i++) {
            value = randomData.nextInt(0,3);
            assertTrue("nextInt range",(value >= 0) && (value <= 3));
            freq.addValue(value);  
        }
        double[] observed = new double[4];
        for (int i=0; i<4; i++) {
            String iString = new Integer(i).toString();
            observed[i] = freq.getCount(iString);

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       Frequency freq = new Frequency();
       long value = 0;
        for (int i=0;i<smallSampleSize;i++) {
            value = randomData.nextLong(0,3);
            assertTrue("nextInt range",(value >= 0) && (value <= 3));
            freq.addValue(value);  
        }
        double[] observed = new double[4];
        for (int i=0; i<4; i++) {
            String iString = new Integer(i).toString();
            observed[i] = freq.getCount(iString);

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        Frequency freq = new Frequency();
        long value = 0;
        for (int i=0;i<smallSampleSize;i++) {
            value = randomData.nextSecureLong(0,3);
            assertTrue("nextInt range",(value >= 0) && (value <= 3));
            freq.addValue(value);  
        }
        double[] observed = new double[4];
        for (int i=0; i<4; i++) {
            String iString = new Integer(i).toString();
            observed[i] = freq.getCount(iString);

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        Frequency freq = new Frequency();
        int value = 0;
        for (int i=0;i<smallSampleSize;i++) {
            value = randomData.nextSecureInt(0,3);
            assertTrue("nextInt range",(value >= 0) && (value <= 3));
            freq.addValue(value);  
        }
        double[] observed = new double[4];
        for (int i=0; i<4; i++) {
            String iString = new Integer(i).toString();
            observed[i] = freq.getCount(iString);

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        }
        Frequency f = new Frequency();
        long v = 0;
        for (int i = 0; i<largeSampleSize; i++) {
            try {
                f.addValue(randomData.nextPoisson(4.0d));
            } catch (Exception ex) {
                fail(ex.getMessage());
            }
        }
        long cumFreq = f.getCount("0") + f.getCount("1") + f.getCount("2") +

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            hexString = randomData.nextHexString(100);
            if (hexString.length() != 100) {
                fail("incorrect length for generated string");
            }
            for (int j = 0; j < hexString.length(); j++) {
                f.addValue(hexString.substring(j,j+1));
            }
        }
        double[] expected = new double[16];
        double[] observed = new double[16];
        for (int i = 0; i < 16; i++) {

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            hexString = randomData.nextSecureHexString(100);
            if (hexString.length() != 100) {
                fail("incorrect length for generated string");
            }
            for (int j = 0; j < hexString.length(); j++) {
                f.addValue(hexString.substring(j,j+1));
            }
        }
        double[] expected = new double[16];
        double[] observed = new double[16];
        for (int i = 0; i < 16; i++) {

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                Frequency f = new Frequency();
                List<Integer> scores = new ArrayList<Integer>();


                for (IGVFeature feature : featureList) {
                    SpliceJunctionFeature junctionFeature = (SpliceJunctionFeature) feature;
                    f.addValue(junctionFeature.getScore());
                    scores.add((int) junctionFeature.getScore());
                }


                Collections.sort(scores);
                Collections.reverse(scores);

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