Package htsjdk.tribble.util

Examples of htsjdk.tribble.util.LittleEndianInputStream.readLong()

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           itemCount = lbdis.readLong();
           startChromID = lbdis.readInt();
           startBase = lbdis.readInt();
           endChromID = lbdis.readInt();
           endBase = lbdis.readInt();
           endFileOffset = lbdis.readLong();
           itemsPerSlot = lbdis.readInt();
           reserved = lbdis.readInt();
       }
       else {
           bdis = new DataInputStream(new ByteArrayInputStream(buffer));
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                if (isLeaf) {
                    long dataOffset;
                    long dataSize;
                    if (isLowToHigh) {
                        dataOffset = lbdis.readLong();
                        dataSize = lbdis.readLong();
                    } else {
                        dataOffset = bdis.readLong();
                        dataSize = bdis.readLong();
                    }
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                if (isLeaf) {
                    long dataOffset;
                    long dataSize;
                    if (isLowToHigh) {
                        dataOffset = lbdis.readLong();
                        dataSize = lbdis.readLong();
                    } else {
                        dataOffset = bdis.readLong();
                        dataSize = bdis.readLong();
                    }
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                            dataOffset, dataSize));
                } else {
                    // get the child node pointed to in the node item
                    long nodeOffset;
                    if (isLowToHigh) {
                        nodeOffset = lbdis.readLong();
                    } else {
                        nodeOffset = bdis.readLong();
                    }

                    // Recursive call to read next child node
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