vcb.attribute(VCFConstants.END_KEY, block.getStop());
// create the single Genotype with GQ and DP annotations
final GenotypeBuilder gb = new GenotypeBuilder(sampleName, GATKVariantContextUtils.homozygousAlleleList(block.getRef(),block.getPloidy()));
gb.noAD().noPL().noAttributes(); // clear all attributes
gb.GQ(block.getMedianGQ());
gb.DP(block.getMedianDP());
gb.attribute(MIN_DP_FORMAT_FIELD, block.getMinDP());
gb.PL(block.getMinPLs());
// This annotation is no longer standard