Examples of estimateTheoreticMass()

Examples of com.compomics.util.experiment.biology.Peptide.estimateTheoreticMass()

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                                        }
                                    }

                                    if (idFilter.validateModifications(peptide, sequenceMatchingPreferences, searchParameters.getModificationProfile())) {
                                        // Estimate the theoretic mass with the new modifications
                                        peptide.estimateTheoreticMass();
                                        if (!idFilter.validatePrecursor(peptideAssumption, spectrumKey, spectrumFactory)) {
                                            spectrumMatch.removeAssumption(assumption);
                                            precursorIssue++;
                                        } else if (!idFilter.validateProteins(peptideAssumption.getPeptide(), sequenceMatchingPreferences)) {
                                            // Check whether there is a potential first hit which does not belong to both the target and the decoy database
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