Examples of estimateErrors()


Examples of eu.isas.peptideshaker.recalibration.SpectrumRecalibrator.estimateErrors()

                    waitingHandler.setSecondaryProgressCounter(0);
                    waitingHandler.setSecondaryProgressCounterIndeterminate(false);
                    waitingHandler.setMaxSecondaryProgressCounter(2 * spectrumFactory.getNSpectra(fileName));
                }

                spectrumRecalibrator.estimateErrors(fileName, identification, annotationPreferences, waitingHandler);
            }

            PSParameter psParameter = new PSParameter();
            identification.loadSpectrumMatchParameters(fileName, psParameter, waitingHandler);

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Examples of eu.isas.peptideshaker.recalibration.SpectrumRecalibrator.estimateErrors()

                waitingHandler.resetSecondaryProgressCounter();
                waitingHandler.setSecondaryProgressCounterIndeterminate(false);
                waitingHandler.setMaxSecondaryProgressCounter(2 * spectrumFactory.getNSpectra(fileName));
            }

            spectrumRecalibrator.estimateErrors(fileName, identification, annotationPreferences, waitingHandler);

            // Debug part
            if (debug) {

                RunMzDeviation runMzDeviation = spectrumRecalibrator.getRunMzDeviations(fileName);
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