Collection<OWLAxiom> additions, Collection<OWLAxiom> deletions, ReasonerComparisonMethod comparisonMethod) {
PelletReasoner unified = PelletReasonerFactory.getInstance().createNonBufferingReasoner( ontology );
IncrementalClassifier modular = PelletIncremantalReasonerFactory.getInstance().createReasoner( ontology, modExtractor );
PelletOptions.USE_CLASSIFICATION_MONITOR = PelletOptions.MonitorType.CONSOLE;
modular.classify();
comparisonMethod.compare( unified, modular );
OntologyUtils.addAxioms( ontology, additions );
OntologyUtils.removeAxioms( ontology, deletions );