Examples of convertFromOWL()

Examples of org.biopax.paxtools.io.BioPAXIOHandler.convertFromOWL()

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      assert model != null || filename != null : "One and only one must be null";

      if (model == null)
      {
        BioPAXIOHandler reader = new SimpleIOHandler();
        model = reader.convertFromOWL(new FileInputStream(filename));
      }

      // Don't do anything if the source model does not contain anything
      if (model.getObjects().isEmpty())
      {
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Examples of org.biopax.paxtools.io.BioPAXIOHandler.convertFromOWL()

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    try
    {
      if (model == null)
      {
        BioPAXIOHandler reader = new SimpleIOHandler();
        model = reader.convertFromOWL(new FileInputStream(xmlFile));
      }

      if (model != null)
      {
        BioPAXLevel level = model.getLevel();
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Examples of org.biopax.paxtools.io.SimpleIOHandler.convertFromOWL()

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      assert model != null || filename != null : "One and only one must be null";

      if (model == null)
      {
        BioPAXIOHandler reader = new SimpleIOHandler();
        model = reader.convertFromOWL(new FileInputStream(filename));
      }

      // Don't do anything if the source model does not contain anything
      if (model.getObjects().isEmpty())
      {
View Full Code Here

Examples of org.biopax.paxtools.io.SimpleIOHandler.convertFromOWL()

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    try
    {
      if (model == null)
      {
        BioPAXIOHandler reader = new SimpleIOHandler();
        model = reader.convertFromOWL(new FileInputStream(xmlFile));
      }

      if (model != null)
      {
        BioPAXLevel level = model.getLevel();
View Full Code Here
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