Examples of adapterTrimIlluminaSingleRead()

Examples of picard.util.AdapterMarker.adapterTrimIlluminaSingleRead()

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                }

                adapterMarker.adapterTrimIlluminaPairedReads(first, second);
            }
            else {
                adapterMarker.adapterTrimIlluminaSingleRead(rec);
            }

            // Then output the records, update progress and metrics
            for (final SAMRecord r : new SAMRecord[] {rec, rec2}) {
                if (r != null) {
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