sent.setSentenceNumber(sentNum);
}
sentNum++;
sent.addToIndexes();
for (int j=0; j < tokenArrays[i].length; j++) {
WordToken tok = new WordToken(jcas);
LineAndTokenPosition word = new LineAndTokenPosition();
word.setLine(i+1);
word.setTokenOffset(j);
LineTokenToCharacterOffsetConverter.BeginAndEndCharacterOffsetPair tPos = converter.convert(word);
if (tPos == null) {
tok.setBegin(0);
tok.setEnd(1);
} else {
tok.setBegin(tPos.getBegin());
tok.setEnd(tPos.getEnd() + 1);
}
tok.setTokenNumber(tokNum);
tokNum++;
tok.addToIndexes();
}
}
for (Annotation a : assertions) {
Concept assertion = new Concept(jcas);
LineAndTokenPosition assertionStart = new LineAndTokenPosition();