Package uk.ac.bbsrc.tgac.miso.core.service.naming

Examples of uk.ac.bbsrc.tgac.miso.core.service.naming.DefaultLibraryNamingScheme

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  @Before
  public void setUp() {
    dataObjectFactory = new TgacDataObjectFactory();
    sampleNamingScheme = new DefaultSampleNamingScheme();
    libraryNamingScheme = new DefaultLibraryNamingScheme();
  }
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    try {
      InputStream in = FormUtilsTests.class.getClassLoader().getResourceAsStream("test-bulk_input.ods");
      LimsUtils.writeFile(in, testSampleBulkInputOdsFile);
      User u = new UserImpl();
      u.setLoginName("testBulkImportUser");
      List<Sample> samples = FormUtils.importSampleInputSpreadsheet(testSampleBulkInputOdsFile, u, new MockFormTestRequestManager(), new DefaultLibraryNamingScheme());
      log.info("Imported :: " + LimsUtils.join(samples, " | "));
    }
    catch (Exception e) {
      e.printStackTrace();
      TestCase.fail();
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    try {
      InputStream in = FormUtilsTests.class.getClassLoader().getResourceAsStream("test-bulk_input.xlsx");
      LimsUtils.writeFile(in, testSampleBulkInputXlsFile);
      User u = new UserImpl();
      u.setLoginName("testBulkImportUser");
      List<Sample> samples = FormUtils.importSampleInputSpreadsheet(testSampleBulkInputXlsFile, u, new MockFormTestRequestManager(), new DefaultLibraryNamingScheme());
      log.info("Imported :: " + LimsUtils.join(samples, " | "));
    }
    catch (Exception e) {
      e.printStackTrace();
      TestCase.fail();
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Related Classes of uk.ac.bbsrc.tgac.miso.core.service.naming.DefaultLibraryNamingScheme

  • uk.ac.bbsrc.tgac.miso.core.test.FormUtilsTests
  • uk.ac.bbsrc.tgac.miso.core.test.NamingTests
  • java.lang.reflect.Method
  • java.util.regex.Matcher
  • java.util.regex.Pattern
  • uk.ac.bbsrc.tgac.miso.core.exception.MisoNamingException
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