Examples of RutaBasic

Examples of org.apache.uima.ruta.type.RutaBasic

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      return false;
    }
    int begin = annotationFS.getBegin();
    int end = annotationFS.getEnd();
    Set<Type> currentHiddenTypes = filter.getCurrentHiddenTypes();
    RutaBasic beginAnchor = getBeginAnchor(begin);
    if (beginAnchor != null) {
      for (Type type : currentHiddenTypes) {
        boolean partOf = beginAnchor.isPartOf(type);
        if (partOf) {
          return false;
        }
      }
    }
    RutaBasic endAnchor = getEndAnchor(end);
    if (endAnchor != null) {
      for (Type type : currentHiddenTypes) {
        boolean partOf = endAnchor.isPartOf(type);
        if (partOf) {
          return false;
        }
      }
    }
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Examples of org.apache.uima.ruta.type.RutaBasic

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    List<RuleMatch> result = new ArrayList<RuleMatch>();
    AnnotationFS nextOne = annotation;
    boolean doneHere = false;
    while (!doneHere && (nextOne = getNextPositionForComposed(cre, after, nextOne, stream)) != null) {
      int pointer = after ? nextOne.getBegin() : nextOne.getEnd();
      RutaBasic anchor = stream.getAnchor(!after, pointer);
      ComposedRuleElementMatch extendedContainerMatch = containerMatch.copy();
      RuleMatch extendedMatch = ruleMatch.copy(extendedContainerMatch, after);
      AnnotationFS coveredByWildCard = getCoveredByWildCard(after, annotation, nextOne, stream);
      doMatch(coveredByWildCard, extendedMatch, extendedContainerMatch, annotation == null, stream,
              crowd);
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Examples of org.apache.uima.ruta.type.RutaBasic

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    }
    boolean doneHere = false;
    while (!doneHere && iterator.isValid() && stream.isVisible(iterator.get())) {
      AnnotationFS nextOne = iterator.get();
      int pointer = after ? nextOne.getBegin() : nextOne.getEnd();
      RutaBasic anchor = stream.getAnchor(!after, pointer);

      ComposedRuleElementMatch extendedContainerMatch = containerMatch.copy();
      RuleMatch extendedMatch = ruleMatch.copy(extendedContainerMatch, after);

      AnnotationFS coveredByWildCard = getCoveredByWildCard(after, annotation, nextOne, stream);
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Examples of org.apache.uima.ruta.type.RutaBasic

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        nextElement.continueMatch(after, annotation, ruleMatch, ruleApply, nextContainerMatch,
                sideStepOrigin, null, stream, crowd);
        doneHere = true;
        break;
      }
      RutaBasic anchor = stream.getAnchor(after, indexOf + delta);
      RutaBasic endAnchor = stream.getAnchor(!after, indexOf + delta);
      ComposedRuleElementMatch extendedContainerMatch = containerMatch.copy();
      RuleMatch extendedMatch = ruleMatch.copy(extendedContainerMatch, after);
      AnnotationFS coveredByWildCard = getCoveredByWildCard(after, annotation, anchor, stream);
      doMatch(coveredByWildCard, extendedMatch, extendedContainerMatch, annotation == null, stream,
              crowd);
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Examples of org.apache.uima.ruta.type.RutaBasic

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      end = later.getBegin();
    }

    int filteredBegin = begin;
    int filteredEnd = end;
    RutaBasic beginAnchor = stream.getBeginAnchor(begin);
    RutaBasic endAnchor = stream.getEndAnchor(end);
    if (beginAnchor != null && !stream.isVisible(beginAnchor)) {
      beginAnchor = stream.getBasicNextTo(false, beginAnchor);
      if (beginAnchor != null) {
        filteredBegin = beginAnchor.getBegin();
      }
    }
    if (endAnchor != null && !stream.isVisible(endAnchor)) {
      endAnchor = stream.getBasicNextTo(true, endAnchor);
      if (endAnchor != null) {
        filteredEnd = endAnchor.getEnd();
      }
    }

    if (filteredBegin < filteredEnd) {
      begin = filteredBegin;
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Examples of org.apache.uima.ruta.type.RutaBasic

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          char[] ignoreChars, int maxIgnoredChars, boolean ignoreWS) {
    ArrayList<AnnotationFS> results = new ArrayList<AnnotationFS>();
    stream.moveToFirst();
    FSIterator<AnnotationFS> streamPointer = stream.copy();
    while (stream.isValid()) {
      RutaBasic anchorBasic = (RutaBasic) stream.get();
      streamPointer.moveTo(anchorBasic);

      List<RutaBasic> basicsToAdd = new ArrayList<RutaBasic>();
      basicsToAdd.add(anchorBasic);
      String text = anchorBasic.getCoveredText();
      StringBuilder candidate = new StringBuilder(text);
      // String lastCandidate = candidate.toString();
      Annotation interResult = null;
      while (streamPointer.isValid()) {
        if (containsFragment(candidate.toString(), ignoreCase, size, ignoreChars, maxIgnoredChars,
                ignoreWS)) {
          streamPointer.moveToNext();
          if (streamPointer.isValid()) {
            RutaBasic next = (RutaBasic) streamPointer.get();
            if (contains(candidate.toString(), ignoreCase, size, ignoreChars, maxIgnoredChars,
                    ignoreWS)) {
              interResult = new Annotation(stream.getJCas(), basicsToAdd.get(0).getBegin(),
                      basicsToAdd.get(basicsToAdd.size() - 1).getEnd());
            }
            // lastCandidate = candidate.toString();
            candidate.append(next.getCoveredText());
            basicsToAdd.add(next);
          } else {
            tryToCreateAnnotation(stream, ignoreCase, size, results, basicsToAdd,
                    candidate.toString(), interResult, ignoreChars, maxIgnoredChars, ignoreWS);
          }
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Examples of org.apache.uima.ruta.type.RutaBasic

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    }
    List<String> tokens = new ArrayList<String>();
    FSIterator<org.apache.uima.jcas.tcas.Annotation> iterator = cas.getAnnotationIndex(
            RutaBasic.type).iterator();
    while (iterator.isValid()) {
      RutaBasic each = (RutaBasic) iterator.get();
      String replace = each.getReplacement() == null ? each.getCoveredText() : each
              .getReplacement();
      Type type = getColorType(each, coloredTypes, cas);
      if (type != null && !"".equals(replace)) {
        StyleMapEntry entry = styleMap.get(type.getName());
        String backgroundColor = "#"
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Examples of org.apache.uima.ruta.type.RutaBasic

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  @Override
  public void execute(RuleMatch match, RuleElement element, RutaStream stream, InferenceCrowd crowd) {
    List<AnnotationFS> matchedAnnotations = match.getMatchedAnnotations(null,
            element.getContainer());
    for (AnnotationFS matchedAnnotation : matchedAnnotations) {
      RutaBasic beginAnchor = stream.getBeginAnchor(matchedAnnotation.getBegin());
      createAnnotation(beginAnchor, element, stream, match);
    }
  }
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Examples of org.apache.uima.ruta.type.RutaBasic

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          char[] ignoreToken, int maxIgnoredTokens, boolean ignoreWS) {
    List<AnnotationFS> result = new ArrayList<AnnotationFS>();
    for (String each : list) {
      stream.moveToFirst();
      while (stream.hasNext()) {
        RutaBasic next = (RutaBasic) stream.next();
        if (each.equals(next.getCoveredText())) {
          result.add(next);
        }
      }
    }
    return result;
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Examples of org.apache.uima.ruta.type.RutaBasic

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      int localBegin = 0;
      int localEnd = 0;
      while (windowStream.isValid()) {
        FeatureStructure fs = windowStream.get();
        if (fs instanceof RutaBasic) {
          RutaBasic basic = (RutaBasic) fs;
          for (Type type : types) {
            Collection<AnnotationFS> beginAnchors = basic.getBeginAnchors(type);
            for (AnnotationFS a : beginAnchors) {
              if (a != null && !a.getType().getName().equals("uima.tcas.DocumentAnnotation")
                      && !(a instanceof RutaBasic)) {
                fsToAdd.add(a);
              }
            }
          }
          int length = basic.getEnd() - basic.getBegin();
          localEnd = localBegin + length;

          new2oldBegin.put(localBegin, basic.getBegin());
          old2newBegin.put(basic.getBegin(), localBegin);
          new2oldEnd.put(localEnd, basic.getEnd());
          old2newEnd.put(basic.getEnd(), localEnd);

          newDocument.append(basic.getCoveredText());

          localBegin += length;
        }
        windowStream.moveToNext();
      }
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