final String title = sampleName + "_" + replicateCount; //$NON-NLS-1$
final CvParamType protocolDescription = PrideParamFactory.getCvParam( "PSI", "PSI:1000287", "Time-Of-Flight Mass Spectrometer", null ); //$NON-NLS-1$ //$NON-NLS-2$ //$NON-NLS-3$
final ParamType stepDescription = new ParamType();
stepDescription.getCvParamOrUserParam().add( protocolDescription );
final ProtocolSteps steps = new ProtocolSteps();
steps.getStepDescription().add( stepDescription );
final Protocol protocol = new Protocol();
protocol.setProtocolName( "Protocol" ); //$NON-NLS-1$
protocol.setProtocolSteps( steps );
final ParamType additional = new ParamType();