Package org.apache.hadoop.hbase.client

Examples of org.apache.hadoop.hbase.client.Mutation


      // we acquire at least one.
      // ----------------------------------
      int numReadyToWrite = 0;
      long now = EnvironmentEdgeManager.currentTimeMillis();
      while (lastIndexExclusive < batchOp.operations.length) {
        Mutation mutation = batchOp.operations[lastIndexExclusive];
        boolean isPutMutation = mutation instanceof Put;

        Map<byte[], List<Cell>> familyMap = mutation.getFamilyCellMap();
        // store the family map reference to allow for mutations
        familyMaps[lastIndexExclusive] = familyMap;

        // skip anything that "ran" already
        if (batchOp.retCodeDetails[lastIndexExclusive].getOperationStatusCode()
            != OperationStatusCode.NOT_RUN) {
          lastIndexExclusive++;
          continue;
        }

        try {
          if (isPutMutation) {
            // Check the families in the put. If bad, skip this one.
            if (isInReplay) {
              removeNonExistentColumnFamilyForReplay(familyMap);
            } else {
              checkFamilies(familyMap.keySet());
            }
            checkTimestamps(mutation.getFamilyCellMap(), now);
          } else {
            prepareDelete((Delete) mutation);
          }
        } catch (NoSuchColumnFamilyException nscf) {
          LOG.warn("No such column family in batch mutation", nscf);
          batchOp.retCodeDetails[lastIndexExclusive] = new OperationStatus(
              OperationStatusCode.BAD_FAMILY, nscf.getMessage());
          lastIndexExclusive++;
          continue;
        } catch (FailedSanityCheckException fsce) {
          LOG.warn("Batch Mutation did not pass sanity check", fsce);
          batchOp.retCodeDetails[lastIndexExclusive] = new OperationStatus(
              OperationStatusCode.SANITY_CHECK_FAILURE, fsce.getMessage());
          lastIndexExclusive++;
          continue;
        }

        // If we haven't got any rows in our batch, we should block to
        // get the next one.
        boolean shouldBlock = numReadyToWrite == 0;
        RowLock rowLock = null;
        try {
          rowLock = getRowLock(mutation.getRow(), shouldBlock);
        } catch (IOException ioe) {
          LOG.warn("Failed getting lock in batch put, row="
            + Bytes.toStringBinary(mutation.getRow()), ioe);
        }
        if (rowLock == null) {
          // We failed to grab another lock
          assert !shouldBlock : "Should never fail to get lock when blocking";
          break; // stop acquiring more rows for this batch
        } else {
          acquiredRowLocks.add(rowLock);
        }

        lastIndexExclusive++;
        numReadyToWrite++;

        if (isPutMutation) {
          // If Column Families stay consistent through out all of the
          // individual puts then metrics can be reported as a mutliput across
          // column families in the first put.
          if (putsCfSet == null) {
            putsCfSet = mutation.getFamilyCellMap().keySet();
          } else {
            putsCfSetConsistent = putsCfSetConsistent
                && mutation.getFamilyCellMap().keySet().equals(putsCfSet);
          }
        } else {
          if (deletesCfSet == null) {
            deletesCfSet = mutation.getFamilyCellMap().keySet();
          } else {
            deletesCfSetConsistent = deletesCfSetConsistent
                && mutation.getFamilyCellMap().keySet().equals(deletesCfSet);
          }
        }
      }

      // we should record the timestamp only after we have acquired the rowLock,
      // otherwise, newer puts/deletes are not guaranteed to have a newer timestamp
      now = EnvironmentEdgeManager.currentTimeMillis();
      byte[] byteNow = Bytes.toBytes(now);

      // Nothing to put/delete -- an exception in the above such as NoSuchColumnFamily?
      if (numReadyToWrite <= 0) return 0L;

      // We've now grabbed as many mutations off the list as we can

      // ------------------------------------
      // STEP 2. Update any LATEST_TIMESTAMP timestamps
      // ----------------------------------
      for (int i = firstIndex; i < lastIndexExclusive; i++) {
        // skip invalid
        if (batchOp.retCodeDetails[i].getOperationStatusCode()
            != OperationStatusCode.NOT_RUN) continue;

        Mutation mutation = batchOp.operations[i];
        if (mutation instanceof Put) {
          updateKVTimestamps(familyMaps[i].values(), byteNow);
          noOfPuts++;
        } else {
          prepareDeleteTimestamps(familyMaps[i], byteNow);
          noOfDeletes++;
        }
      }

      lock(this.updatesLock.readLock(), numReadyToWrite);
      locked = true;

      //
      // ------------------------------------
      // Acquire the latest mvcc number
      // ----------------------------------
      w = mvcc.beginMemstoreInsert();

      // calling the pre CP hook for batch mutation
      if (!isInReplay && coprocessorHost != null) {
        MiniBatchOperationInProgress<Mutation> miniBatchOp =
          new MiniBatchOperationInProgress<Mutation>(batchOp.operations,
          batchOp.retCodeDetails, batchOp.walEditsFromCoprocessors, firstIndex, lastIndexExclusive);
        if (coprocessorHost.preBatchMutate(miniBatchOp)) return 0L;
      }

      // ------------------------------------
      // STEP 3. Write back to memstore
      // Write to memstore. It is ok to write to memstore
      // first without updating the HLog because we do not roll
      // forward the memstore MVCC. The MVCC will be moved up when
      // the complete operation is done. These changes are not yet
      // visible to scanners till we update the MVCC. The MVCC is
      // moved only when the sync is complete.
      // ----------------------------------
      long addedSize = 0;
      for (int i = firstIndex; i < lastIndexExclusive; i++) {
        if (batchOp.retCodeDetails[i].getOperationStatusCode()
            != OperationStatusCode.NOT_RUN) {
          continue;
        }
        doRollBackMemstore = true; // If we have a failure, we need to clean what we wrote
        addedSize += applyFamilyMapToMemstore(familyMaps[i], w);
      }

      // ------------------------------------
      // STEP 4. Build WAL edit
      // ----------------------------------
      Durability durability = Durability.USE_DEFAULT;
      for (int i = firstIndex; i < lastIndexExclusive; i++) {
        // Skip puts that were determined to be invalid during preprocessing
        if (batchOp.retCodeDetails[i].getOperationStatusCode()
            != OperationStatusCode.NOT_RUN) {
          continue;
        }
        batchOp.retCodeDetails[i] = OperationStatus.SUCCESS;

        Mutation m = batchOp.operations[i];
        Durability tmpDur = getEffectiveDurability(m.getDurability());
        if (tmpDur.ordinal() > durability.ordinal()) {
          durability = tmpDur;
        }
        if (tmpDur == Durability.SKIP_WAL) {
          recordMutationWithoutWal(m.getFamilyCellMap());
          continue;
        }

        // Add WAL edits by CP
        WALEdit fromCP = batchOp.walEditsFromCoprocessors[i];
        if (fromCP != null) {
          for (KeyValue kv : fromCP.getKeyValues()) {
            walEdit.add(kv);
          }
        }
        addFamilyMapToWALEdit(familyMaps[i], walEdit);
      }

      // -------------------------
      // STEP 5. Append the edit to WAL. Do not sync wal.
      // -------------------------
      Mutation mutation = batchOp.operations[firstIndex];
      if (walEdit.size() > 0) {
        txid = this.log.appendNoSync(this.getRegionInfo(), this.htableDescriptor.getTableName(),
              walEdit, mutation.getClusterIds(), now, this.htableDescriptor);
      }

      // -------------------------------
      // STEP 6. Release row locks, etc.
      // -------------------------------
      if (locked) {
        this.updatesLock.readLock().unlock();
        locked = false;
      }
      releaseRowLocks(acquiredRowLocks);

      // -------------------------
      // STEP 7. Sync wal.
      // -------------------------
      if (walEdit.size() > 0) {
        syncOrDefer(txid, durability);
      }
      doRollBackMemstore = false;
      // calling the post CP hook for batch mutation
      if (!isInReplay && coprocessorHost != null) {
        MiniBatchOperationInProgress<Mutation> miniBatchOp =
          new MiniBatchOperationInProgress<Mutation>(batchOp.operations,
          batchOp.retCodeDetails, batchOp.walEditsFromCoprocessors, firstIndex, lastIndexExclusive);
        coprocessorHost.postBatchMutate(miniBatchOp);
      }

      // ------------------------------------------------------------------
      // STEP 8. Advance mvcc. This will make this put visible to scanners and getters.
      // ------------------------------------------------------------------
      if (w != null) {
        mvcc.completeMemstoreInsert(w);
        w = null;
      }

      // ------------------------------------
      // STEP 9. Run coprocessor post hooks. This should be done after the wal is
      // synced so that the coprocessor contract is adhered to.
      // ------------------------------------
      if (!isInReplay && coprocessorHost != null) {
        for (int i = firstIndex; i < lastIndexExclusive; i++) {
          // only for successful puts
          if (batchOp.retCodeDetails[i].getOperationStatusCode()
              != OperationStatusCode.SUCCESS) {
            continue;
          }
          Mutation m = batchOp.operations[i];
          if (m instanceof Put) {
            coprocessorHost.postPut((Put) m, walEdit, m.getDurability());
          } else {
            coprocessorHost.postDelete((Delete) m, walEdit, m.getDurability());
          }
        }
      }

      success = true;
View Full Code Here


          new TreeMap<TableName, Map<List<UUID>, List<Row>>>();
      for (WALEntry entry : entries) {
        TableName table =
            TableName.valueOf(entry.getKey().getTableName().toByteArray());
        Cell previousCell = null;
        Mutation m = null;
        int count = entry.getAssociatedCellCount();
        for (int i = 0; i < count; i++) {
          // Throw index out of bounds if our cell count is off
          if (!cells.advance()) {
            throw new ArrayIndexOutOfBoundsException("Expected=" + count + ", index=" + i);
          }
          Cell cell = cells.current();
          if (isNewRowOrType(previousCell, cell)) {
            // Create new mutation
            m = CellUtil.isDelete(cell)?
              new Delete(cell.getRowArray(), cell.getRowOffset(), cell.getRowLength()):
              new Put(cell.getRowArray(), cell.getRowOffset(), cell.getRowLength());
            List<UUID> clusterIds = new ArrayList<UUID>();
            for(HBaseProtos.UUID clusterId : entry.getKey().getClusterIdsList()){
              clusterIds.add(toUUID(clusterId));
            }
            m.setClusterIds(clusterIds);
            addToHashMultiMap(rowMap, table, clusterIds, m);
          }
          if (CellUtil.isDelete(cell)) {
            ((Delete)m).addDeleteMarker(KeyValueUtil.ensureKeyValue(cell));
          } else {
View Full Code Here

    boolean batchContainsPuts = false, batchContainsDelete = false;
    try {
      int i = 0;
      for (ClientProtos.Action action: mutations) {
        MutationProto m = action.getMutation();
        Mutation mutation;
        if (m.getMutateType() == MutationType.PUT) {
          mutation = ProtobufUtil.toPut(m, cells);
          batchContainsPuts = true;
        } else {
          mutation = ProtobufUtil.toDelete(m, cells);
View Full Code Here

      Map<TableName, Map<UUID,List<Row>>> rowMap = new TreeMap<TableName, Map<UUID,List<Row>>>();
      for (WALEntry entry : entries) {
        TableName table =
            TableName.valueOf(entry.getKey().getTableName().toByteArray());
        Cell previousCell = null;
        Mutation m = null;
        java.util.UUID uuid = toUUID(entry.getKey().getClusterId());
        int count = entry.getAssociatedCellCount();
        for (int i = 0; i < count; i++) {
          // Throw index out of bounds if our cell count is off
          if (!cells.advance()) {
            throw new ArrayIndexOutOfBoundsException("Expected=" + count + ", index=" + i);
          }
          Cell cell = cells.current();
          if (isNewRowOrType(previousCell, cell)) {
            // Create new mutation
            m = CellUtil.isDelete(cell)?
              new Delete(cell.getRowArray(), cell.getRowOffset(), cell.getRowLength()):
              new Put(cell.getRowArray(), cell.getRowOffset(), cell.getRowLength());
            m.setClusterId(uuid);
            addToHashMultiMap(rowMap, table, uuid, m);
          }
          if (CellUtil.isDelete(cell)) {
            ((Delete)m).addDeleteMarker(KeyValueUtil.ensureKeyValue(cell));
          } else {
View Full Code Here

      throws IOException {
    /* Run coprocessor pre hook outside of locks to avoid deadlock */
    WALEdit walEdit = new WALEdit();
    if (coprocessorHost != null) {
      for (int i = 0 ; i < batchOp.operations.length; i++) {
        Mutation m = batchOp.operations[i];
        if (m instanceof Put) {
          if (coprocessorHost.prePut((Put) m, walEdit, m.getDurability())) {
            // pre hook says skip this Put
            // mark as success and skip in doMiniBatchMutation
            batchOp.retCodeDetails[i] = OperationStatus.SUCCESS;
          }
        } else if (m instanceof Delete) {
          if (coprocessorHost.preDelete((Delete) m, walEdit, m.getDurability())) {
            // pre hook says skip this Delete
            // mark as success and skip in doMiniBatchMutation
            batchOp.retCodeDetails[i] = OperationStatus.SUCCESS;
          }
        } else {
View Full Code Here

      // we acquire at least one.
      // ----------------------------------
      int numReadyToWrite = 0;
      long now = EnvironmentEdgeManager.currentTimeMillis();
      while (lastIndexExclusive < batchOp.operations.length) {
        Mutation mutation = batchOp.operations[lastIndexExclusive];
        boolean isPutMutation = mutation instanceof Put;

        Map<byte[], List<Cell>> familyMap = mutation.getFamilyCellMap();
        // store the family map reference to allow for mutations
        familyMaps[lastIndexExclusive] = familyMap;

        // skip anything that "ran" already
        if (batchOp.retCodeDetails[lastIndexExclusive].getOperationStatusCode()
            != OperationStatusCode.NOT_RUN) {
          lastIndexExclusive++;
          continue;
        }

        try {
          if (isPutMutation) {
            // Check the families in the put. If bad, skip this one.
            if (isInReplay) {
              removeNonExistentColumnFamilyForReplay(familyMap);
            } else {
              checkFamilies(familyMap.keySet());
            }
            checkTimestamps(mutation.getFamilyCellMap(), now);
          } else {
            prepareDelete((Delete) mutation);
          }
        } catch (NoSuchColumnFamilyException nscf) {
          LOG.warn("No such column family in batch mutation", nscf);
          batchOp.retCodeDetails[lastIndexExclusive] = new OperationStatus(
              OperationStatusCode.BAD_FAMILY, nscf.getMessage());
          lastIndexExclusive++;
          continue;
        } catch (FailedSanityCheckException fsce) {
          LOG.warn("Batch Mutation did not pass sanity check", fsce);
          batchOp.retCodeDetails[lastIndexExclusive] = new OperationStatus(
              OperationStatusCode.SANITY_CHECK_FAILURE, fsce.getMessage());
          lastIndexExclusive++;
          continue;
        }

        // If we haven't got any rows in our batch, we should block to
        // get the next one.
        boolean shouldBlock = numReadyToWrite == 0;
        RowLock rowLock = null;
        try {
          rowLock = getRowLock(mutation.getRow(), shouldBlock);
        } catch (IOException ioe) {
          LOG.warn("Failed getting lock in batch put, row="
            + Bytes.toStringBinary(mutation.getRow()), ioe);
        }
        if (rowLock == null) {
          // We failed to grab another lock
          assert !shouldBlock : "Should never fail to get lock when blocking";
          break; // stop acquiring more rows for this batch
        } else {
          acquiredRowLocks.add(rowLock);
        }

        lastIndexExclusive++;
        numReadyToWrite++;

        if (isPutMutation) {
          // If Column Families stay consistent through out all of the
          // individual puts then metrics can be reported as a mutliput across
          // column families in the first put.
          if (putsCfSet == null) {
            putsCfSet = mutation.getFamilyCellMap().keySet();
          } else {
            putsCfSetConsistent = putsCfSetConsistent
                && mutation.getFamilyCellMap().keySet().equals(putsCfSet);
          }
        } else {
          if (deletesCfSet == null) {
            deletesCfSet = mutation.getFamilyCellMap().keySet();
          } else {
            deletesCfSetConsistent = deletesCfSetConsistent
                && mutation.getFamilyCellMap().keySet().equals(deletesCfSet);
          }
        }
      }

      // we should record the timestamp only after we have acquired the rowLock,
      // otherwise, newer puts/deletes are not guaranteed to have a newer timestamp
      now = EnvironmentEdgeManager.currentTimeMillis();
      byte[] byteNow = Bytes.toBytes(now);

      // Nothing to put/delete -- an exception in the above such as NoSuchColumnFamily?
      if (numReadyToWrite <= 0) return 0L;

      // We've now grabbed as many mutations off the list as we can

      // ------------------------------------
      // STEP 2. Update any LATEST_TIMESTAMP timestamps
      // ----------------------------------
      for (int i = firstIndex; i < lastIndexExclusive; i++) {
        // skip invalid
        if (batchOp.retCodeDetails[i].getOperationStatusCode()
            != OperationStatusCode.NOT_RUN) continue;

        Mutation mutation = batchOp.operations[i];
        if (mutation instanceof Put) {
          updateKVTimestamps(familyMaps[i].values(), byteNow);
          noOfPuts++;
        } else {
          prepareDeleteTimestamps(familyMaps[i], byteNow);
          noOfDeletes++;
        }
      }

      lock(this.updatesLock.readLock(), numReadyToWrite);
      locked = true;

      //
      // ------------------------------------
      // Acquire the latest mvcc number
      // ----------------------------------
      w = mvcc.beginMemstoreInsert();

      // calling the pre CP hook for batch mutation
      if (!isInReplay && coprocessorHost != null) {
        MiniBatchOperationInProgress<Mutation> miniBatchOp =
          new MiniBatchOperationInProgress<Mutation>(batchOp.operations,
          batchOp.retCodeDetails, batchOp.walEditsFromCoprocessors, firstIndex, lastIndexExclusive);
        if (coprocessorHost.preBatchMutate(miniBatchOp)) return 0L;
      }

      // ------------------------------------
      // STEP 3. Write back to memstore
      // Write to memstore. It is ok to write to memstore
      // first without updating the HLog because we do not roll
      // forward the memstore MVCC. The MVCC will be moved up when
      // the complete operation is done. These changes are not yet
      // visible to scanners till we update the MVCC. The MVCC is
      // moved only when the sync is complete.
      // ----------------------------------
      long addedSize = 0;
      for (int i = firstIndex; i < lastIndexExclusive; i++) {
        if (batchOp.retCodeDetails[i].getOperationStatusCode()
            != OperationStatusCode.NOT_RUN) {
          continue;
        }
        addedSize += applyFamilyMapToMemstore(familyMaps[i], w);
      }

      // ------------------------------------
      // STEP 4. Build WAL edit
      // ----------------------------------
      Durability durability = Durability.USE_DEFAULT;
      for (int i = firstIndex; i < lastIndexExclusive; i++) {
        // Skip puts that were determined to be invalid during preprocessing
        if (batchOp.retCodeDetails[i].getOperationStatusCode()
            != OperationStatusCode.NOT_RUN) {
          continue;
        }
        batchOp.retCodeDetails[i] = OperationStatus.SUCCESS;

        Mutation m = batchOp.operations[i];
        Durability tmpDur = getEffectiveDurability(m.getDurability());
        if (tmpDur.ordinal() > durability.ordinal()) {
          durability = tmpDur;
        }
        if (tmpDur == Durability.SKIP_WAL) {
          recordMutationWithoutWal(m.getFamilyCellMap());
          continue;
        }

        // Add WAL edits by CP
        WALEdit fromCP = batchOp.walEditsFromCoprocessors[i];
        if (fromCP != null) {
          for (KeyValue kv : fromCP.getKeyValues()) {
            walEdit.add(kv);
          }
        }
        addFamilyMapToWALEdit(familyMaps[i], walEdit);
      }

      // -------------------------
      // STEP 5. Append the edit to WAL. Do not sync wal.
      // -------------------------
      Mutation mutation = batchOp.operations[firstIndex];
      if (walEdit.size() > 0) {
        txid = this.log.appendNoSync(this.getRegionInfo(), this.htableDescriptor.getTableName(),
               walEdit, mutation.getClusterId(), now, this.htableDescriptor);
      }

      // -------------------------------
      // STEP 6. Release row locks, etc.
      // -------------------------------
      if (locked) {
        this.updatesLock.readLock().unlock();
        locked = false;
      }
      releaseRowLocks(acquiredRowLocks);

      // -------------------------
      // STEP 7. Sync wal.
      // -------------------------
      if (walEdit.size() > 0) {
        syncOrDefer(txid, durability);
      }
      walSyncSuccessful = true;
      // calling the post CP hook for batch mutation
      if (!isInReplay && coprocessorHost != null) {
        MiniBatchOperationInProgress<Mutation> miniBatchOp =
          new MiniBatchOperationInProgress<Mutation>(batchOp.operations,
          batchOp.retCodeDetails, batchOp.walEditsFromCoprocessors, firstIndex, lastIndexExclusive);
        coprocessorHost.postBatchMutate(miniBatchOp);
      }

      // ------------------------------------------------------------------
      // STEP 8. Advance mvcc. This will make this put visible to scanners and getters.
      // ------------------------------------------------------------------
      if (w != null) {
        mvcc.completeMemstoreInsert(w);
        w = null;
      }

      // ------------------------------------
      // STEP 9. Run coprocessor post hooks. This should be done after the wal is
      // synced so that the coprocessor contract is adhered to.
      // ------------------------------------
      if (!isInReplay && coprocessorHost != null) {
        for (int i = firstIndex; i < lastIndexExclusive; i++) {
          // only for successful puts
          if (batchOp.retCodeDetails[i].getOperationStatusCode()
              != OperationStatusCode.SUCCESS) {
            continue;
          }
          Mutation m = batchOp.operations[i];
          if (m instanceof Put) {
            coprocessorHost.postPut((Put) m, walEdit, m.getDurability());
          } else {
            coprocessorHost.postDelete((Delete) m, walEdit, m.getDurability());
          }
        }
      }

      success = true;
View Full Code Here

      ActionResult.Builder resultBuilder = ActionResult.newBuilder();
      resultBuilder.setValue(ClientProtos.Result.newBuilder().build());
      ActionResult result = resultBuilder.build();
      int i = 0;
      for (MutationProto m : mutations) {
        Mutation mutation;
        if (m.getMutateType() == MutationType.PUT) {
          mutation = ProtobufUtil.toPut(m, cells);
          batchContainsPuts = true;
        } else {
          mutation = ProtobufUtil.toDelete(m, cells);
View Full Code Here

    boolean batchContainsPuts = false, batchContainsDelete = false;
    try {
      int i = 0;
      for (ClientProtos.Action action: mutations) {
        MutationProto m = action.getMutation();
        Mutation mutation;
        if (m.getMutateType() == MutationType.PUT) {
          mutation = ProtobufUtil.toPut(m, cells);
          batchContainsPuts = true;
        } else {
          mutation = ProtobufUtil.toDelete(m, cells);
View Full Code Here

      return;
    }
    // TODO this can be made as a global LRU cache at HRS level?
    Map<String, List<Tag>> labelCache = new HashMap<String, List<Tag>>();
    for (int i = 0; i < miniBatchOp.size(); i++) {
      Mutation m = miniBatchOp.getOperation(i);
      CellVisibility cellVisibility = null;
      try {
        cellVisibility = m.getCellVisibility();
      } catch (DeserializationException de) {
        miniBatchOp.setOperationStatus(i,
            new OperationStatus(SANITY_CHECK_FAILURE, de.getMessage()));
        continue;
      }
View Full Code Here

      Map<String, Integer> existingLabels = labelsAndUserAuths.getFirst();
      Map<String, List<Integer>> userAuths = labelsAndUserAuths.getSecond();
      boolean isNewLabels = false;
      boolean isUserAuthsChange = false;
      for (int i = 0; i < miniBatchOp.size(); i++) {
        Mutation m = miniBatchOp.getOperation(i);
        if (miniBatchOp.getOperationStatus(i).getOperationStatusCode() == SUCCESS) {
          for (List<Cell> cells : m.getFamilyCellMap().values()) {
            for (Cell cell : cells) {
              int labelOrdinal = Bytes.toInt(cell.getRowArray(), cell.getRowOffset());
              if (Bytes.equals(cell.getQualifierArray(), cell.getQualifierOffset(),
                      cell.getQualifierLength(), LABEL_QUALIFIER, 0,
                      LABEL_QUALIFIER.length)) {
View Full Code Here

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