Examples of MiriamLink

uk.ac.ebi.miriam.lib.MiriamLink

bi.ac.uk/miriam/" title="Web Site of MIRIAM Resources">MIRIAM Resources, for more information.

Copyright:: Copyright (C) 2006-2010 Camille Laibe (EMBL - European Bioinformatics Institute, Computational Neurobiology Group)
This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.

@author Camille Laibe @version 20100302

  
    return variableDetailsLight;
  }
      
  private String getMiriam(String ontologyAccession, String termAccession){
    MiriamLink link = new MiriamLink();


    // Sets the address to access the Web Services
    link.setAddress("http://www.ebi.ac.uk/miriamws/main/MiriamWebServices");


    return link.getURI(ontologyAccession, termAccession);  
  }

  
  /** Test MIRIAM connection */
     public static boolean testMIRIAMConnection() {
         String test = null;
       try {
              MiriamLink link = new MiriamLink();
             link.setAddress(MIRIAM_URL);
             test = link.getDataTypeURI("ChEBI");
             
         } catch (Exception e) {
             // we couldn't connect:
           e.printStackTrace();
             return false;

          obj.getClass().equals(Transition.class) ){
      sbmlObject = (AbstractNamedSBase) obj;
    }
    
    // Creation of the link to the Web Services
    link = new MiriamLink();
    link.setAddress(MiriamWSInterface.MIRIAM_URL);
  }

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Examples of MiriamLink

Examples of uk.ac.ebi.miriam.lib.MiriamLink

Examples of uk.ac.ebi.miriam.lib.MiriamLink

Examples of uk.ac.ebi.miriam.lib.MiriamLink