Examples of GapPenaltyDefinitionUnrecognizedTypeException

Examples of org.lightforge.bioinformatics.alignment.GapPenaltyDefinitionUnrecognizedTypeException

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    case SIMPLE:
      return getFinalCellsSimpleGapPenaly();
    case AFFINE:
      return getFinalCellsAffineGapPenaly();
    default:
      throw new GapPenaltyDefinitionUnrecognizedTypeException(_context.get_gapPenaltyDefinition().get_type().toString());
    }
  }
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Examples of org.lightforge.bioinformatics.alignment.GapPenaltyDefinitionUnrecognizedTypeException

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    case SIMPLE:
      return checkPrerequisitesSimpleGapPenalty();
    case AFFINE:
      return checkPrerequisitesAffineGapPenalty();
    default:
      throw new GapPenaltyDefinitionUnrecognizedTypeException(_gapPenaltyDefinition.get_type().toString());
    }
  } 
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Examples of org.lightforge.bioinformatics.alignment.GapPenaltyDefinitionUnrecognizedTypeException

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      break;
    case AFFINE:
      evaluateAffineGapPenalty();
      break;
    default:
      throw new GapPenaltyDefinitionUnrecognizedTypeException(_gapPenaltyDefinition.get_type().toString());
    }
  }
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