Examples of ExperimentDataManager

org.patika.mada.util.ExperimentDataManager
This class manages the loaded microarray data to the client. A manager per aplication exists. This is initialized in parallel with ChisioMain class. @author Ozgun BaburCopyright: Bilkent Center for Bioinformatics, 2007 - present

Examples of org.patika.mada.util.ExperimentDataManager


  public void setExperimentData(ChisioExperimentData data, String fileLocation)
  {
    String type = data.getExperimentType();


    ExperimentDataManager man = new ExperimentDataManager(data, fileLocation);
    dataManagerMap.put(type, man);


    if (rootGraph != null)
    {
      man.associateExperimentData(rootGraph);


      for (ScrollingGraphicalViewer viewer : tabToViewerMap.values())
      {
        BioPAXGraph graph = (BioPAXGraph) viewer.getContents().getModel();
        man.associateExperimentData(graph);
      }
    }
  }

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Examples of org.patika.mada.util.ExperimentDataManager

      return;
    }


    for (String type : dataManagerMap.keySet())
    {
      ExperimentDataManager man = dataManagerMap.get(type);
      man.associateExperimentData(graph);
    }


    String type = graph.getLastAppliedColoring();
    if (type != null)
    {

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Examples of org.patika.mada.util.ExperimentDataManager


  public void setExperimentData(ChisioExperimentData data, String fileLocation)
  {
    String type = data.getExperimentType();


    ExperimentDataManager man = new ExperimentDataManager(data, fileLocation);
    dataManagerMap.put(type, man);


    if (rootGraph != null)
    {
      man.associateExperimentData(rootGraph);


      for (ScrollingGraphicalViewer viewer : tabToViewerMap.values())
      {
        BioPAXGraph graph = (BioPAXGraph) viewer.getContents().getModel();
        man.associateExperimentData(graph);
      }
    }
  }

View Full Code Here

Examples of org.patika.mada.util.ExperimentDataManager

      return;
    }


    for (String type : dataManagerMap.keySet())
    {
      ExperimentDataManager man = dataManagerMap.get(type);
      man.associateExperimentData(graph);
    }


    String type = graph.getLastAppliedColoring();
    if (type != null)
    {

View Full Code Here

Examples of org.patika.mada.util.ExperimentDataManager


  public void setExperimentData(ChisioExperimentData data, String fileLocation)
  {
    String type = data.getExperimentType();


    ExperimentDataManager man = new ExperimentDataManager(data, fileLocation);
    dataManagerMap.put(type, man);


    if (rootGraph != null)
    {
      man.clearExperimentData(rootGraph);
      man.associateExperimentData(rootGraph);


      for (ScrollingGraphicalViewer viewer : tabToViewerMap.values())
      {
        BioPAXGraph graph = (BioPAXGraph) viewer.getContents().getModel();
        man.clearExperimentData(graph);
        man.associateExperimentData(graph);
      }
    }
  }

View Full Code Here

Examples of org.patika.mada.util.ExperimentDataManager

      return;
    }


    for (String type : dataManagerMap.keySet())
    {
      ExperimentDataManager man = dataManagerMap.get(type);
      man.associateExperimentData(graph);
    }


    String type = graph.getLastAppliedColoring();
    if (type != null)
    {

View Full Code Here

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