Examples of EquivalenceDataIndex

org.openbel.framework.common.model.EquivalenceDataIndex
EquivalenceDataIndex represents a {@link DataFileIndex} that is bound to asource and target namespace. @author Anthony Bargnesi {@code }

Examples of org.openbel.framework.common.model.EquivalenceDataIndex

            final DataFileIndex equivalenceIndex =
                    eqIndexer.indexEquivalence(
                            equivalence.getResourceLocation(),
                            resolved.getCacheResourceCopy());


            final EquivalenceDataIndex dataIndex = new EquivalenceDataIndex(
                    equivalence.getNamespaceResourceLocation()
                            .getResourceLocation(), equivalenceIndex);


            JDBMEquivalenceLookup jdbmLookup =
                    new JDBMEquivalenceLookup(dataIndex.getEquivalenceIndex()
                            .getIndexPath());
            jdbmLookup.open();


            openEquivalences.put(equivalence.getNamespaceResourceLocation()
                    .getResourceLocation(),

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Examples of org.openbel.framework.common.model.EquivalenceDataIndex


                    DataFileIndex equivalenceIndex = equivalenceIndexerService
                            .indexEquivalence(eqLocation,
                                    resolved.getCacheResourceCopy());


                    equivalenceDataIndexSet.add(new EquivalenceDataIndex(
                            eqResource.getNamespaceResourceLocation()
                                    .getResourceLocation(), equivalenceIndex));
                } catch (ResourceDownloadError e) {
                    error("Unable to load equivalence resource for location: "
                            + eqLocation);

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Examples of org.openbel.framework.common.model.EquivalenceDataIndex

            pnNsLocations.add(tn.getResourceLocation());
        }


        Iterator<EquivalenceDataIndex> indexIt = indexes.iterator();
        while (indexIt.hasNext()) {
            EquivalenceDataIndex index = indexIt.next();


            // if proto network does not contain this index, throw it away
            if (!pnNsLocations.contains(index.getNamespaceResourceLocation())) {
                indexIt.remove();
            }
        }


        if (!indexes.isEmpty()) {

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