Examples of DiPCM

Examples of ru.autosome.commons.motifModel.di.DiPCM

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    super(count);
  }

  @Override
  protected DiPCM createMotif(double[][] matrix, String name) {
    return new DiPCM(matrix, name);
  }
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Examples of ru.autosome.commons.motifModel.di.DiPCM

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  @Override
  public DiPWM createMotif(double matrix[][], String name) {
    DiPWM dipwm;
    switch (dataModel) {
      case PCM:
        dipwm = new DiPCM(matrix, name).to_pwm(background);
        break;
      case PPM:
        dipwm = new DiPPM(matrix, name).to_pwm(background, effectiveCount);
        break;
      case PWM:
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