Package com.compomics.util.gui.waiting.waitinghandlers

Examples of com.compomics.util.gui.waiting.waitinghandlers.ProgressDialogX

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        JPanel ionTableCorner = new JPanel();
        ionTableCorner.setBackground(proteinTable.getTableHeader().getBackground());
        fragmentIonsJScrollPane.setCorner(ScrollPaneConstants.UPPER_RIGHT_CORNER, ionTableCorner);

        // add table sorting listeners
        SelfUpdatingTableModel.addSortListener(proteinTable, new ProgressDialogX(peptideShakerGUI,
                Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                true));
        SelfUpdatingTableModel.addSortListener(peptideTable, new ProgressDialogX(peptideShakerGUI,
                Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                true));
        SelfUpdatingTableModel.addSortListener(psmTable, new ProgressDialogX(peptideShakerGUI,
                Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                true));

        // add table scrolling listeners
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                // update the table model
                if (psmTable.getModel() instanceof PsmTableModel) {
                    ((PsmTableModel) psmTable.getModel()).updateDataModel(peptideShakerGUI, psmKeys);
                    ((PsmTableModel) psmTable.getModel()).setSelfUpdating(true);
                    ((PsmTableModel) psmTable.getModel()).resetSorting(new ProgressDialogX(peptideShakerGUI,
                            Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                            Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                            true));
                } else {
                    PsmTableModel psmTableModel = new PsmTableModel(peptideShakerGUI, psmKeys);
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                // update the table model
                if (peptideTable.getModel() instanceof PeptideTableModel) {
                    ((PeptideTableModel) peptideTable.getModel()).updateDataModel(peptideShakerGUI, accession, peptideKeys);
                    ((PeptideTableModel) peptideTable.getModel()).setSelfUpdating(true);
                    ((PeptideTableModel) peptideTable.getModel()).resetSorting(new ProgressDialogX(peptideShakerGUI,
                            Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                            Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                            true));
                } else {
                    PeptideTableModel peptideTableModel = new PeptideTableModel(peptideShakerGUI, accession, peptideKeys);
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    /**
     * Displays the results in the tables.
     */
    public void displayResults() {

        progressDialog = new ProgressDialogX(peptideShakerGUI,
                Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                true);
        progressDialog.setPrimaryProgressCounterIndeterminate(true);
        progressDialog.setTitle("Loading Overview. Please Wait...");
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        int returnVal = fileChooser.showDialog(this, "Add");

        if (returnVal == JFileChooser.APPROVE_OPTION) {

            progressDialog = new ProgressDialogX(this, peptideShakerGUI,
                    Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                    Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                    true);
            progressDialog.setPrimaryProgressCounterIndeterminate(true);
            progressDialog.setTitle("Loading Files. Please Wait...");
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        final File downloadFolder = Util.getUserSelectedFolder(this, "Select SearchGUI Folder", installPath, "SearchGUI Folder", "Select", false);

        if (downloadFolder != null) {

            progressDialog = new ProgressDialogX(dummyParentFrame,
                    Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/searchgui.gif")),
                    Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/searchgui-orange.gif")),
                    true);

            progressDialog.setPrimaryProgressCounterIndeterminate(true);
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            } else {
                selectedFile = peptideShakerGUI.getUserSelectedFile(".xls", "Excel Workbook (.xls)", "Export...", false);
            }

            if (selectedFile != null) {
                progressDialog = new ProgressDialogX(this, peptideShakerGUI,
                        Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                        Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                        true);
                progressDialog.setTitle("Exporting Report. Please Wait...");
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            } else {
                selectedFile = peptideShakerGUI.getUserSelectedFile(".xls", "Excel Workbook (.xls)", "Export...", false);
            }

            if (selectedFile != null) {
                progressDialog = new ProgressDialogX(this, peptideShakerGUI,
                        Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                        Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                        true);

                new Thread(new Runnable() {
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    /**
     * Set up the GUI.
     */
    private void setUpGui() {

        progressDialog = new ProgressDialogX(peptideShakerGUI,
                Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                true);
        progressDialog.setPrimaryProgressCounterIndeterminate(true);
        progressDialog.setTitle("Loading Project Details. Please Wait...");
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                e.printStackTrace();
                return;
            }

            if (parentDialog != null) {
                progressDialog = new ProgressDialogX(parentDialog, peptideShakerGUI,
                        Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                        Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                        true);
            } else {
                progressDialog = new ProgressDialogX(peptideShakerGUI,
                        Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker.gif")),
                        Toolkit.getDefaultToolkit().getImage(getClass().getResource("/icons/peptide-shaker-orange.gif")),
                        true);
            }
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Related Classes of com.compomics.util.gui.waiting.waitinghandlers.ProgressDialogX

  • eu.isas.peptideshaker.export.OutputGenerator
  • eu.isas.peptideshaker.gui.exportdialogs.FeaturesPreferencesDialog
  • eu.isas.peptideshaker.gui.exportdialogs.FollowupPreferencesDialog
  • eu.isas.peptideshaker.gui.exportdialogs.InclusionListExportDialog
  • eu.isas.peptideshaker.gui.exportdialogs.MethodsSectionDialog
  • eu.isas.peptideshaker.gui.exportdialogs.MzIdentMLExportDialog
  • eu.isas.peptideshaker.gui.NewDialog
  • eu.isas.peptideshaker.gui.PeptideShakerGUI
  • eu.isas.peptideshaker.gui.preferencesdialogs.ProjectDetailsDialog
  • eu.isas.peptideshaker.gui.pride.DatabaseHelpDialog
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