Examples of BedReader


Examples of fork.lib.bio.anno.genomic.BedReader

   
public static void main(String[] args) throws Exception { //debug
    File f= new File("E:\\muxingu\\mystudy\\phd\\files\\anno\\bed\\hg19\\enhancers/human_unsort.bed");
    File out= new File("E:\\muxingu\\mystudy\\phd\\files\\anno\\bed\\hg19\\enhancers/human_sorted.bed");
   
    GenomicRegionsBuilder gb= new BedReader(f).getGenomicRegionsBuilder();
    gb.sortAll();
   
    new BedExporter(gb).writeToFile(out);
   
   
View Full Code Here
TOP
Copyright © 2018 www.massapi.com. All rights reserved.
All source code are property of their respective owners. Java is a trademark of Sun Microsystems, Inc and owned by ORACLE Inc. Contact coftware#gmail.com.