Examples of BELAnnotation


        BELStatement stmt = stmts.get(0);
        List<BELAnnotation> annos = stmt.getAnnotations();
        assertTrue(annos.size() == 1);


        BELAnnotation anno = annos.get(0);
        assertTrue(anno.getValues().size() == 1);


        assertTrue("0.42".equals(anno.getValues().get(0)));
    }

Examples of org.openbel.bel.model.BELAnnotation

                    final String name = an.getText();


                    BELAnnotationDefinition ad = definedAnnotations.get(name);
                    if (ad != null) {
                        // read annotation value
                        final BELAnnotation annotation;
                        if (qv != null) {
                            annotation = new BELAnnotation(ad, qv.getText());
                        } else if (oi != null) {
                            annotation = new BELAnnotation(ad, oi.getText());
                        } else {
                            if (list == null) {
                                throw new IllegalStateException("Did not understand annotation value, expecting annotation list form.");
                            }


                            String listvalues = list.getText();
                            listvalues = listvalues.substring(1, listvalues.length() - 1);
                            annotation = new BELAnnotation(ad, Arrays.asList(ParserUtil.parseListRecord(listvalues)));
                        }


                        if (activeStatementGroup != null) {
                            // add to local statement group scope
                            sgAnnotationContext.put(name, annotation);

Examples of org.openbel.bel.model.BELAnnotation

            }


            values.add(ann.getValue());
        }


        return new BELAnnotation(badc.convert(ad), values);
    }