}
}
//test with no markers
@Test
public void testForwardNoMarkers(){
ProteinLocation expectedLocation = new ProteinLocation("q0", 10, 129, "+", "0");
List<ProteinLocation> expectedArray = new ArrayList<ProteinLocation>();
expectedArray.add(expectedLocation);
String [] mascotFiles = {"test/resources/merger/test_mascot_search_results.txt"};
File genomeFile = new File("test/resources/merger/virtual_protein_no_markers.gff");
File chromosomeDir = new File("test/resources/merger/");