Package org.encog.neural.networks.structure

Source Code of org.encog.neural.networks.structure.AnalyzeNetwork

/*
* Encog(tm) Core v3.0 - Java Version
* http://www.heatonresearch.com/encog/
* http://code.google.com/p/encog-java/
* Copyright 2008-2011 Heaton Research, Inc.
*
* Licensed under the Apache License, Version 2.0 (the "License");
* you may not use this file except in compliance with the License.
* You may obtain a copy of the License at
*
*     http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
* WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
* See the License for the specific language governing permissions and
* limitations under the License.
*  
* For more information on Heaton Research copyrights, licenses
* and trademarks visit:
* http://www.heatonresearch.com/copyright
*/
package org.encog.neural.networks.structure;

import java.util.ArrayList;
import java.util.List;

import org.encog.mathutil.NumericRange;
import org.encog.neural.networks.BasicNetwork;
import org.encog.neural.networks.layers.Layer;
import org.encog.util.EngineArray;
import org.encog.util.Format;

/**
* Allows the weights and bias values of the neural network to be analyzed.
*/
public class AnalyzeNetwork {

  /**
   * The ranges of the weights.
   */
  private final NumericRange weights;

  /**
   * The ranges of the bias values.
   */
  private final NumericRange bias;

  /**
   * The ranges of both the weights and biases.
   */
  private final NumericRange weightsAndBias;

  /**
   * The number of disabled connections.
   */
  private final int disabledConnections;

  /**
   * The total number of connections.
   */
  private final int totalConnections;

  /**
   * All of the values in the neural network.
   */
  private final double[] allValues;

  /**
   * The weight values in the neural network.
   */
  private final double[] weightValues;

  /**
   * The bias values in the neural network.
   */
  private final double[] biasValues;

  /**
   * Construct a network analyze class. Analyze the specified network.
   *
   * @param network
   *            The network to analyze.
   */
  public AnalyzeNetwork(final BasicNetwork network) {
    final int assignDisabled = 0;
    final int assignedTotal = 0;
    final List<Double> biasList = new ArrayList<Double>();
    final List<Double> weightList = new ArrayList<Double>();
    final List<Double> allList = new ArrayList<Double>();

    for (int layerNumber = 0; layerNumber < network.getLayerCount() - 1; layerNumber++) {
      final int fromCount = network.getLayerNeuronCount(layerNumber);
      final int fromBiasCount = network
          .getLayerTotalNeuronCount(layerNumber);
      final int toCount = network.getLayerNeuronCount(layerNumber + 1);

      // weights
      for (int fromNeuron = 0; fromNeuron < fromCount; fromNeuron++) {
        for (int toNeuron = 0; toNeuron < toCount; toNeuron++) {
          final double v = network.getWeight(layerNumber, fromNeuron,
              toNeuron);
          weightList.add(v);
          allList.add(v);
        }
      }

      // bias
      if (fromCount != fromBiasCount) {
        final int biasNeuron = fromCount;
        for (int toNeuron = 0; toNeuron < toCount; toNeuron++) {
          final double v = network.getWeight(layerNumber, biasNeuron,
              toNeuron);
          biasList.add(v);
          allList.add(v);
        }
      }
    }

    for (final Layer layer : network.getStructure().getLayers()) {
      if (layer.hasBias()) {
        for (int i = 0; i < layer.getNeuronCount(); i++) {

        }
      }
    }

    this.disabledConnections = assignDisabled;
    this.totalConnections = assignedTotal;
    this.weights = new NumericRange(weightList);
    this.bias = new NumericRange(biasList);
    this.weightsAndBias = new NumericRange(allList);
    this.weightValues = EngineArray.listToDouble(weightList);
    this.allValues = EngineArray.listToDouble(allList);
    this.biasValues = EngineArray.listToDouble(biasList);
  }

  /**
   * @return All of the values in the neural network.
   */
  public final double[] getAllValues() {
    return this.allValues;
  }

  /**
   * @return The numeric range of the bias values.
   */
  public final NumericRange getBias() {
    return this.bias;
  }

  /**
   * @return The bias values in the neural network.
   */
  public final double[] getBiasValues() {
    return this.biasValues;
  }

  /**
   * @return The number of disabled connections in the network.
   */
  public final int getDisabledConnections() {
    return this.disabledConnections;
  }

  /**
   * @return The total number of connections in the network.
   */
  public final int getTotalConnections() {
    return this.totalConnections;
  }

  /**
   * @return The numeric range of the weights values.
   */
  public final NumericRange getWeights() {
    return this.weights;
  }

  /**
   * @return The numeric range of the weights and bias values.
   */
  public final NumericRange getWeightsAndBias() {
    return this.weightsAndBias;
  }

  /**
   * @return The weight values in the neural network.
   */
  public final double[] getWeightValues() {
    return this.weightValues;
  }

  /**
   * {@inheritDoc}
   */
  @Override
  public final String toString() {
    final StringBuilder result = new StringBuilder();
    result.append("All Values : ");
    result.append(this.weightsAndBias.toString());
    result.append("\n");
    result.append("Bias : ");
    result.append(this.bias.toString());
    result.append("\n");
    result.append("Weights    : ");
    result.append(this.weights.toString());
    result.append("\n");
    result.append("Disabled   : ");
    result.append(Format.formatInteger(this.disabledConnections));
    result.append("\n");
    return result.toString();
  }

}
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