Package edu.stanford.genetics.treeview.plugin.scatterview

Source Code of edu.stanford.genetics.treeview.plugin.scatterview.ScatterColorPresets

/* BEGIN_HEADER                                              Java TreeView
*
* $Author: rqluk $
* $RCSfile: ScatterColorPresets.java,v $
* $Revision: 1.1 $
* $Date: 2006-08-16 19:13:49 $
* $Name:  $
*
* This file is part of Java TreeView
* Copyright (C) 2001-2003 Alok Saldanha, All Rights Reserved. Modified by Alex Segal 2004/08/13. Modifications Copyright (C) Lawrence Berkeley Lab.
*
* This software is provided under the GNU GPL Version 2. In particular,
*
* 1) If you modify a source file, make a comment in it containing your name and the date.
* 2) If you distribute a modified version, you must do it under the GPL 2.
* 3) Developers are encouraged but not required to notify the Java TreeView maintainers at alok@genome.stanford.edu when they make a useful addition. It would be nice if significant contributions could be merged into the main distribution.
*
* A full copy of the license can be found in gpl.txt or online at
* http://www.gnu.org/licenses/gpl.txt
*
* END_HEADER
*/
package edu.stanford.genetics.treeview.plugin.scatterview;

import edu.stanford.genetics.treeview.ConfigNode;
import edu.stanford.genetics.treeview.DummyConfigNode;
/**
* This class encapsulates a list of ScatterColorSet presets.
*/
public class ScatterColorPresets {
  private ConfigNode root;
  private final static int dIndex = 0; // which preset to use if not by confignode?
    /**
     * creates a new ColorPresets object and binds it to the node
   *
   * adds default Presets if  none are currently set.
     */
    public ScatterColorPresets (ConfigNode parent) {
    super();
    bindConfig(parent);
    int nNames = getPresetNames().length;
    if (nNames == 0) {
      addDefaultPresets();
    }
   
    }
    public ScatterColorPresets () {
    this(new DummyConfigNode("ScatterColorPresets"));
  }

  /**
  * returns default preset, for use when opening a new file which has no color settings
  */
  public int getDefaultIndex() {
    return root.getAttribute("default", dIndex);
  }

  public boolean isDefaultEnabled() {
    return (getDefaultIndex() != -1);
  }

  public ScatterColorSet getDefaultColorSet() {
    int defaultPreset = getDefaultIndex();
    try {
    return getColorSet(defaultPreset);
    } catch (Exception e) {
    return getColorSet(0);
    }
  }
 
  public void setDefaultIndex(int i) {
    root.setAttribute("default", i, dIndex);
  }

  public static ScatterColorSet [] defaultColorSets;
 
  static {
    defaultColorSets  = new ScatterColorSet[2];
    defaultColorSets[0] = new ScatterColorSet("BlackBG",
    "#000000","#00FF00", "#FFFF00",
    "#FFFFFF");
    defaultColorSets[1] = new ScatterColorSet("WhiteBG",
    "#FFFFFF","#00FF00","#999900",
    "#000000");
  }

    public void addDefaultPresets() {   
    for (int i = 0; i < defaultColorSets.length; i++) {
      addColorSet(defaultColorSets[i]);
    }
    }

    /**
     * returns String [] of preset names for display
     */
    public String[] getPresetNames()
    {
        ConfigNode aconfigNode[] = root.fetch("ScatterColorSet");
        String astring[] = new String[aconfigNode.length];
    ScatterColorSet temp = new ScatterColorSet("TempColorSet");
    for (int i = 0; i < aconfigNode.length; i++) {
      temp.bindConfig(aconfigNode[i]);
            astring[i] = temp.getName();
    }
    return astring;
    }
  public int getNumPresets() {
        ConfigNode aconfigNode[] = root.fetch("ScatterColorSet");
    return aconfigNode.length;
  }
  public String toString() {
        ConfigNode aconfigNode[] = root.fetch("ScatterColorSet");
    ScatterColorSet tmp = new ScatterColorSet();
    String ret = "Default is " + getPresetNames() [getDefaultIndex()] + " index " + getDefaultIndex() + "\n";
    for (int index = 0; index < aconfigNode.length; index++) {
      tmp.bindConfig(aconfigNode[index]);
      ret += tmp.toString() +"\n";
    }
    return ret;
  }
   
    /**
     * returns the color set for the ith preset
     * or null, if any exceptions are thrown.
     */
    public ScatterColorSet getColorSet(int index) {
        ConfigNode aconfigNode[] = root.fetch("ScatterColorSet");
    try {
      ScatterColorSet ret = new ScatterColorSet();
      ret.bindConfig(aconfigNode[index]);
      return ret;
    } catch (Exception e) {
      return null;
    }
    }

    /**
     * returns the color set for this name
     * or null, if name not found in kids
     */
   public ScatterColorSet getColorSet(String name) {
     ConfigNode aconfigNode[] = root.fetch("ScatterColorSet");
     ScatterColorSet ret = new ScatterColorSet();
     for (int i = 0; i < aconfigNode.length; i++) {
     ret.bindConfig(aconfigNode[i]);
     if (name.equals(ret.getName()))  {
       return ret;
     }
     }
     return null;
   }
 
  /**
  * actually copies state of colorset, does not add the colorset itself but a copy.
  */
    public void addColorSet(ScatterColorSet set) {
    ScatterColorSet preset = new ScatterColorSet("AddingColorSet");
    if (root != null) preset.bindConfig(root.create("ScatterColorSet"));
    preset.copyStateFrom(set);
  }
    public void bindConfig(ConfigNode configNode)
    {
    root = configNode;
    int nNames = getPresetNames().length;
    if (nNames == 0) {
      addDefaultPresets();
    }

    }

  public void removeColorSet(int i) {
     ConfigNode aconfigNode[] = root.fetch("ScatterColorSet");
     root.remove(aconfigNode[i]);
  }
   
}
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