Package Taverna.Visitor

Source Code of Taverna.Visitor.AnnotationConverter

package Taverna.Visitor;

import java.util.ArrayList;

import Taverna.Tree.Workflow;
import Taverna.Tree.Annotation.AnnotationAssertionImpl;
import Taverna.Tree.Annotation.AnnotationAssertions;
import Taverna.Tree.Annotation.AnnotationBean;
import Taverna.Tree.Annotation.AnnotationChain;
import Taverna.Tree.Annotation.AnnotationChainImpl;
import Taverna.Tree.Annotation.AnnotationContent;
import Taverna.Tree.Annotation.Annotations;

public class AnnotationConverter extends AnnotationVisitor {

  public Object visit(Annotations annotations){
    int chain_size=annotations.getAnnotationChain().size();
    AnnotationContent annotationContent = new AnnotationContent();
    for (int i=0;i<chain_size;i++){
      ArrayList<String> classList= new ArrayList<String>();
      classList=(ArrayList<String>)visit(annotations.getAnnotationChain().get(i).getAnnotationChainImpl().getAnnotationAssertions().getAnnotationAssertionImpl().getAnnotationBean());
 
      // Assign different part into LONI xml
      if (classList.contains("net.sf.taverna.t2.annotation.annotationbeans.Author")){
        annotationContent.name=new String(classList.get(1));
        annotationContent.iD=annotationContent.name+"_1";
      }
      if (classList.contains("net.sf.taverna.t2.annotation.annotationbeans.FreeTextDescription")){
        annotationContent.description=new String(classList.get(1));
      }
    }
    return annotationContent;
  }
  public Object visit(AnnotationChain annotationChain){
    return null;
  }
 
  public Object visit(AnnotationChainImpl annotationChainImpl){
    return null;
  }
 
  public Object visit(AnnotationAssertions annotationAssertions){
    return null;
  }
 
  public Object visit(AnnotationAssertionImpl annotationAssertionImpl){
    return null;
  }
 
  public Object visit(AnnotationBean annotationBean){
    String myClass=null;
    String myClassText=null;
    try{
      myClass=annotationBean.getMyClass();
      myClassText=annotationBean.getMyClassText();
    }catch (Exception e){}
   
    ArrayList<String> classList=new ArrayList<String>();
    classList.add(myClass);
    classList.add(myClassText);
    return classList;
  }
 
}
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