Package net.imglib2

Source Code of net.imglib2.RealPointSampleListTest

/*
* #%L
* ImgLib2: a general-purpose, multidimensional image processing library.
* %%
* Copyright (C) 2009 - 2014 Stephan Preibisch, Tobias Pietzsch, Barry DeZonia,
* Stephan Saalfeld, Albert Cardona, Curtis Rueden, Christian Dietz, Jean-Yves
* Tinevez, Johannes Schindelin, Lee Kamentsky, Larry Lindsey, Grant Harris,
* Mark Hiner, Aivar Grislis, Martin Horn, Nick Perry, Michael Zinsmaier,
* Steffen Jaensch, Jan Funke, Mark Longair, and Dimiter Prodanov.
* %%
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
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* 1. Redistributions of source code must retain the above copyright notice,
*    this list of conditions and the following disclaimer.
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package net.imglib2;

import static org.junit.Assert.assertTrue;

import java.util.ArrayList;
import java.util.Iterator;
import java.util.Random;

import net.imglib2.RealCursor;
import net.imglib2.RealLocalizable;
import net.imglib2.RealPoint;
import net.imglib2.RealPointSampleList;
import net.imglib2.type.numeric.real.DoubleType;

import org.junit.Before;
import org.junit.Test;

/**
* TODO
*
*/
public class RealPointSampleListTest
{
  final static private int n = 10;

  final static private int m = 10000;

  final static private Random rnd = new Random( 123456 );

  final static private RealPointSampleList< DoubleType > realPointSampleList = new RealPointSampleList< DoubleType >( n );

  final static private ArrayList< RealPoint > realPointList = new ArrayList< RealPoint >();

  final static private ArrayList< DoubleType > sampleList = new ArrayList< DoubleType >();

  final static private boolean positionEquals(
      final RealLocalizable a,
      final RealLocalizable b )
  {
    final int na = a.numDimensions();
    if ( na != b.numDimensions() )
      return false;
    for ( int d = 0; d < na; ++d )
    {
      if ( a.getDoublePosition( d ) != b.getDoublePosition( d ) )
        return false;
    }
    return true;
  }

  @Before
  public void init()
  {
    for ( int i = 0; i < m; ++i )
    {
      final double[] position = new double[ n ];
      for ( int d = 0; d < n; ++d )
        position[ d ] = rnd.nextDouble();

      final RealPoint realPoint = new RealPoint( position );
      final DoubleType sample = new DoubleType( rnd.nextDouble() );

      realPointList.add( realPoint );
      sampleList.add( sample );
      realPointSampleList.add( realPoint, sample );
    }
  }

  @Test
  public void testIteration()
  {
    final Iterator< DoubleType > sampleIterator = sampleList.iterator();
    for ( final DoubleType t : realPointSampleList )
      assertTrue( "Samples differ ", t == sampleIterator.next() );
  }

  @Test
  public void testPosition()
  {
    final Iterator< RealPoint > realPointIterator = realPointList.iterator();
    final RealCursor< DoubleType > realPointSampleCursor = realPointSampleList.cursor();

    while ( realPointSampleCursor.hasNext() )
    {
      realPointSampleCursor.fwd();
      assertTrue( "Positions differ ", positionEquals( realPointIterator.next(), realPointSampleCursor ) );
    }
  }

  @Test
  public void testCopy()
  {
    final ArrayList< RealCursor< DoubleType > > copies = new ArrayList< RealCursor< DoubleType > >();
    final RealCursor< DoubleType > cursor = realPointSampleList.cursor();
    while ( cursor.hasNext() )
    {
      cursor.fwd();
      copies.add( cursor.copyCursor() );
    }

    cursor.reset();
    final Iterator< RealCursor< DoubleType > > copyIterator = copies.iterator();
    while ( cursor.hasNext() )
    {
      cursor.fwd();
      final RealCursor< DoubleType > copy = copyIterator.next();
      assertTrue( "Copy failed at sample ", copy.get() == cursor.get() );
      assertTrue( "Copy failed at position ", positionEquals( copy, cursor ) );
    }

  }
}
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