Package net.imglib2.type.numeric.integer

Source Code of net.imglib2.type.numeric.integer.Unsigned4BitType

/*
* #%L
* ImgLib2: a general-purpose, multidimensional image processing library.
* %%
* Copyright (C) 2009 - 2012 Stephan Preibisch, Stephan Saalfeld, Tobias
* Pietzsch, Albert Cardona, Barry DeZonia, Curtis Rueden, Lee Kamentsky, Larry
* Lindsey, Johannes Schindelin, Christian Dietz, Grant Harris, Jean-Yves
* Tinevez, Steffen Jaensch, Mark Longair, Nick Perry, and Jan Funke.
* %%
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
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* 1. Redistributions of source code must retain the above copyright notice,
*    this list of conditions and the following disclaimer.
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package net.imglib2.type.numeric.integer;

import net.imglib2.img.NativeImg;
import net.imglib2.img.NativeImgFactory;
import net.imglib2.img.basictypeaccess.LongAccess;
import net.imglib2.img.basictypeaccess.array.LongArray;
import net.imglib2.type.Type;
import net.imglib2.util.Fraction;

/**
* A {@link Type} with a bit depth of 2.
*
* The performance of this type is traded off for the gain in memory storage.
*
* @author Albert Cardona
*/
public class Unsigned4BitType extends AbstractIntegerBitType<Unsigned4BitType>
{
  // A mask for bit and, containing nBits of 1
  private final static long mask = 15; // 1111 in binary

  // this is the constructor if you want it to read from an array
  public Unsigned4BitType(
      final NativeImg<Unsigned4BitType,
      ? extends LongAccess> bitStorage)
  {
    super( bitStorage, 4 );
  }

  // this is the constructor if you want it to be a variable
  public Unsigned4BitType( final long value )
  {
    this( (NativeImg<Unsigned4BitType, ? extends LongAccess>)null );
    dataAccess = new LongArray( 1 );
    set( value );
  }

  // this is the constructor if you want to specify the dataAccess
  public Unsigned4BitType( final LongAccess access )
  {
    this( (NativeImg<Unsigned4BitType, ? extends LongAccess>)null );
    dataAccess = access;
  }

  // this is the constructor if you want it to be a variable
  public Unsigned4BitType() { this( 0 ); }

  @Override
  public NativeImg<Unsigned4BitType, ? extends LongAccess> createSuitableNativeImg( final NativeImgFactory<Unsigned4BitType> storageFactory, final long dim[] )
  {
    // create the container
    final NativeImg<Unsigned4BitType, ? extends LongAccess> container = storageFactory.createLongInstance( dim, new Fraction( getBitsPerPixel(), 64 ) );

    // create a Type that is linked to the container
    final Unsigned4BitType linkedType = new Unsigned4BitType( container );

    // pass it to the NativeContainer
    container.setLinkedType( linkedType );

    return container;
  }

  @Override
  public Unsigned4BitType duplicateTypeOnSameNativeImg() { return new Unsigned4BitType( img ); }

  @Override
  public long get() {
    return (dataAccess.getValue((int)(i >>> 4)) >>> ((i & 15) << 2)) & mask;
  }

  // Crops value to within mask
  @Override
  public void set( final long value ) {
    /*
    final int k = i * 4;
    final int i1 = k >>> 6; // k / 64;
    final long shift = k % 64;
    */
    // Same as above minus one multiplication, plus one shift (to multiply by 4)
    final int i1 = (int)(i >>> 4); //  Same as (i * 4) / 64 = ((i << 2) >>> 6)
    final long shift = (i << 2) & 63; // Same as (i * 4) % 64
    // Clear the bits first, then or the masked value
    dataAccess.setValue(i1, (dataAccess.getValue(i1) & ~(mask << shift)) | ((value & mask) << shift));
  }

  @Override
  public Unsigned4BitType createVariable(){ return new Unsigned4BitType( 0 ); }

  @Override
  public Unsigned4BitType copy(){ return new Unsigned4BitType( get() ); }
}
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