Package org.apache.cassandra.db.commitlog

Source Code of org.apache.cassandra.db.commitlog.CommitLogReplayer

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* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License.  You may obtain a copy of the License at
*
*   http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing,
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package org.apache.cassandra.db.commitlog;

import java.io.*;
import java.util.*;
import java.util.concurrent.Future;
import java.util.concurrent.atomic.AtomicInteger;

import com.google.common.base.Predicate;
import com.google.common.collect.HashMultimap;
import com.google.common.collect.Iterables;
import com.google.common.collect.Multimap;
import com.google.common.collect.Ordering;
import org.apache.commons.lang3.StringUtils;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;

import org.apache.cassandra.concurrent.Stage;
import org.apache.cassandra.concurrent.StageManager;
import org.apache.cassandra.config.Schema;
import org.apache.cassandra.db.*;
import org.apache.cassandra.io.util.FastByteArrayInputStream;
import org.apache.cassandra.io.util.FileUtils;
import org.apache.cassandra.io.util.RandomAccessReader;
import org.apache.cassandra.utils.*;

import org.cliffc.high_scale_lib.NonBlockingHashSet;

public class CommitLogReplayer
{
    private static final Logger logger = LoggerFactory.getLogger(CommitLogReplayer.class);
    private static final int MAX_OUTSTANDING_REPLAY_COUNT = 1024;
    private static final int LEGACY_END_OF_SEGMENT_MARKER = 0;

    private final Set<Keyspace> keyspacesRecovered;
    private final List<Future<?>> futures;
    private final Map<UUID, AtomicInteger> invalidMutations;
    private final AtomicInteger replayedCount;
    private final Map<UUID, ReplayPosition> cfPositions;
    private final ReplayPosition globalPosition;
    private final PureJavaCrc32 checksum;
    private byte[] buffer;

    public CommitLogReplayer()
    {
        this.keyspacesRecovered = new NonBlockingHashSet<Keyspace>();
        this.futures = new ArrayList<Future<?>>();
        this.buffer = new byte[4096];
        this.invalidMutations = new HashMap<UUID, AtomicInteger>();
        // count the number of replayed mutation. We don't really care about atomicity, but we need it to be a reference.
        this.replayedCount = new AtomicInteger();
        this.checksum = new PureJavaCrc32();

        // compute per-CF and global replay positions
        cfPositions = new HashMap<UUID, ReplayPosition>();
        Ordering<ReplayPosition> replayPositionOrdering = Ordering.from(ReplayPosition.comparator);
        for (ColumnFamilyStore cfs : ColumnFamilyStore.all())
        {
            // it's important to call RP.gRP per-cf, before aggregating all the positions w/ the Ordering.min call
            // below: gRP will return NONE if there are no flushed sstables, which is important to have in the
            // list (otherwise we'll just start replay from the first flush position that we do have, which is not correct).
            ReplayPosition rp = ReplayPosition.getReplayPosition(cfs.getSSTables());

            // but, if we've truncted the cf in question, then we need to need to start replay after the truncation
            ReplayPosition truncatedAt = SystemKeyspace.getTruncatedPosition(cfs.metadata.cfId);
            if (truncatedAt != null)
                rp = replayPositionOrdering.max(Arrays.asList(rp, truncatedAt));

            cfPositions.put(cfs.metadata.cfId, rp);
        }
        globalPosition = replayPositionOrdering.min(cfPositions.values());
        logger.debug("Global replay position is {} from columnfamilies {}", globalPosition, FBUtilities.toString(cfPositions));
    }

    public void recover(File[] clogs) throws IOException
    {
        for (final File file : clogs)
            recover(file);
    }

    public int blockForWrites()
    {
        for (Map.Entry<UUID, AtomicInteger> entry : invalidMutations.entrySet())
            logger.info(String.format("Skipped %d mutations from unknown (probably removed) CF with id %s", entry.getValue().intValue(), entry.getKey()));

        // wait for all the writes to finish on the mutation stage
        FBUtilities.waitOnFutures(futures);
        logger.debug("Finished waiting on mutations from recovery");

        // flush replayed keyspaces
        futures.clear();
        for (Keyspace keyspace : keyspacesRecovered)
            futures.addAll(keyspace.flush());
        FBUtilities.waitOnFutures(futures);
        return replayedCount.get();
    }

    private int readSyncMarker(CommitLogDescriptor descriptor, int offset, RandomAccessReader reader) throws IOException
    {
        if (offset > reader.length() - CommitLogSegment.SYNC_MARKER_SIZE)
        {
            if (offset != reader.length() && offset != Integer.MAX_VALUE)
                logger.warn("Encountered bad header at position {} of Commit log {}; not enough room for a header", offset, reader.getPath());
            // cannot possibly be a header here. if we're == length(), assume it's a correctly written final segment
            return -1;
        }
        reader.seek(offset);
        PureJavaCrc32 crc = new PureJavaCrc32();
        crc.updateInt((int) (descriptor.id & 0xFFFFFFFFL));
        crc.updateInt((int) (descriptor.id >>> 32));
        crc.updateInt((int) reader.getPosition());
        int end = reader.readInt();
        long filecrc;
        if (descriptor.version < CommitLogDescriptor.VERSION_21)
            filecrc = reader.readLong();
        else
            filecrc = reader.readInt() & 0xffffffffL;
        if (crc.getValue() != filecrc)
        {
            if (end != 0 || filecrc != 0)
            {
                logger.warn("Encountered bad header at position {} of commit log {}, with invalid CRC. The end of segment marker should be zero.", offset, reader.getPath());
            }
            return -1;
        }
        else if (end < offset || end > reader.length())
        {
            logger.warn("Encountered bad header at position {} of commit log {}, with bad position but valid CRC", offset, reader.getPath());
            return -1;
        }
        return end;
    }

    private int getStartOffset(long segmentId, int version)
    {
        if (globalPosition.segment < segmentId)
        {
            if (version >= CommitLogDescriptor.VERSION_21)
                return CommitLogDescriptor.HEADER_SIZE + CommitLogSegment.SYNC_MARKER_SIZE;
            else
                return 0;
        }
        else if (globalPosition.segment == segmentId)
            return globalPosition.position;
        else
            return -1;
    }

    private abstract static class ReplayFilter
    {
        public abstract Iterable<ColumnFamily> filter(Mutation mutation);

        public static ReplayFilter create()
        {
            // If no replaylist is supplied an empty array of strings is used to replay everything.
            if (System.getProperty("cassandra.replayList") == null)
                return new AlwaysReplayFilter();

            Multimap<String, String> toReplay = HashMultimap.create();
            for (String rawPair : System.getProperty("cassandra.replayList").split(","))
            {
                String[] pair = rawPair.trim().split("\\.");
                if (pair.length != 2)
                    throw new IllegalArgumentException("Each table to be replayed must be fully qualified with keyspace name, e.g., 'system.peers'");

                Keyspace ks = Schema.instance.getKeyspaceInstance(pair[0]);
                if (ks == null)
                    throw new IllegalArgumentException("Unknown keyspace " + pair[0]);
                if (ks.getColumnFamilyStore(pair[1]) == null)
                    throw new IllegalArgumentException(String.format("Unknown table %s.%s", pair[0], pair[1]));

                toReplay.put(pair[0], pair[1]);
            }
            return new CustomReplayFilter(toReplay);
        }
    }

    private static class AlwaysReplayFilter extends ReplayFilter
    {
        public Iterable<ColumnFamily> filter(Mutation mutation)
        {
            return mutation.getColumnFamilies();
        }
    }

    private static class CustomReplayFilter extends ReplayFilter
    {
        private Multimap<String, String> toReplay;

        public CustomReplayFilter(Multimap<String, String> toReplay)
        {
            this.toReplay = toReplay;
        }

        public Iterable<ColumnFamily> filter(Mutation mutation)
        {
            final Collection<String> cfNames = toReplay.get(mutation.getKeyspaceName());
            if (cfNames == null)
                return Collections.emptySet();

            return Iterables.filter(mutation.getColumnFamilies(), new Predicate<ColumnFamily>()
            {
                public boolean apply(ColumnFamily cf)
                {
                    return cfNames.contains(cf.metadata().cfName);
                }
            });
        }
    }

    public void recover(File file) throws IOException
    {
        final ReplayFilter replayFilter = ReplayFilter.create();
        logger.info("Replaying {}", file.getPath());
        CommitLogDescriptor desc = CommitLogDescriptor.fromFileName(file.getName());
        final long segmentId = desc.id;
        logger.info("Replaying {} (CL version {}, messaging version {})",
                    file.getPath(),
                    desc.version,
                    desc.getMessagingVersion());
        RandomAccessReader reader = RandomAccessReader.open(new File(file.getAbsolutePath()));

        try
        {
            assert reader.length() <= Integer.MAX_VALUE;
            int offset = getStartOffset(segmentId, desc.version);
            if (offset < 0)
            {
                logger.debug("skipping replay of fully-flushed {}", file);
                return;
            }

            int prevEnd = CommitLogDescriptor.HEADER_SIZE;
            main: while (true)
            {

                int end = prevEnd;
                if (desc.version < CommitLogDescriptor.VERSION_21)
                    end = Integer.MAX_VALUE;
                else
                {
                    do { end = readSyncMarker(desc, end, reader); }
                    while (end < offset && end > prevEnd);
                }

                if (end < prevEnd)
                    break;

                if (logger.isDebugEnabled())
                    logger.debug("Replaying {} between {} and {}", file, offset, end);

                reader.seek(offset);

                 /* read the logs populate Mutation and apply */
                while (reader.getPosition() < end && !reader.isEOF())
                {
                    if (logger.isDebugEnabled())
                        logger.debug("Reading mutation at {}", reader.getFilePointer());

                    long claimedCRC32;
                    int serializedSize;
                    try
                    {
                        // any of the reads may hit EOF
                        serializedSize = reader.readInt();
                        if (serializedSize == LEGACY_END_OF_SEGMENT_MARKER)
                        {
                            logger.debug("Encountered end of segment marker at {}", reader.getFilePointer());
                            break main;
                        }

                        // Mutation must be at LEAST 10 bytes:
                        // 3 each for a non-empty Keyspace and Key (including the
                        // 2-byte length from writeUTF/writeWithShortLength) and 4 bytes for column count.
                        // This prevents CRC by being fooled by special-case garbage in the file; see CASSANDRA-2128
                        if (serializedSize < 10)
                            break main;

                        long claimedSizeChecksum;
                        if (desc.version < CommitLogDescriptor.VERSION_21)
                            claimedSizeChecksum = reader.readLong();
                        else
                            claimedSizeChecksum = reader.readInt() & 0xffffffffL;
                        checksum.reset();
                        if (desc.version < CommitLogDescriptor.VERSION_20)
                            checksum.update(serializedSize);
                        else
                            checksum.updateInt(serializedSize);

                        if (checksum.getValue() != claimedSizeChecksum)
                            break main; // entry wasn't synced correctly/fully. that's
                        // ok.

                        if (serializedSize > buffer.length)
                            buffer = new byte[(int) (1.2 * serializedSize)];
                        reader.readFully(buffer, 0, serializedSize);
                        if (desc.version < CommitLogDescriptor.VERSION_21)
                            claimedCRC32 = reader.readLong();
                        else
                            claimedCRC32 = reader.readInt() & 0xffffffffL;
                    }
                    catch (EOFException eof)
                    {
                        break main; // last CL entry didn't get completely written. that's ok.
                    }

                    checksum.update(buffer, 0, serializedSize);
                    if (claimedCRC32 != checksum.getValue())
                    {
                        // this entry must not have been fsynced. probably the rest is bad too,
                        // but just in case there is no harm in trying them (since we still read on an entry boundary)
                        continue;
                    }

                    /* deserialize the commit log entry */
                    FastByteArrayInputStream bufIn = new FastByteArrayInputStream(buffer, 0, serializedSize);
                    final Mutation mutation;
                    try
                    {
                        mutation = Mutation.serializer.deserialize(new DataInputStream(bufIn),
                                                                   desc.getMessagingVersion(),
                                                                   ColumnSerializer.Flag.LOCAL);
                        // doublecheck that what we read is [still] valid for the current schema
                        for (ColumnFamily cf : mutation.getColumnFamilies())
                            for (Cell cell : cf)
                                cf.getComparator().validate(cell.name());
                    }
                    catch (UnknownColumnFamilyException ex)
                    {
                        if (ex.cfId == null)
                            continue;
                        AtomicInteger i = invalidMutations.get(ex.cfId);
                        if (i == null)
                        {
                            i = new AtomicInteger(1);
                            invalidMutations.put(ex.cfId, i);
                        }
                        else
                            i.incrementAndGet();
                        continue;
                    }
                    catch (Throwable t)
                    {
                        File f = File.createTempFile("mutation", "dat");
                        DataOutputStream out = new DataOutputStream(new FileOutputStream(f));
                        try
                        {
                            out.write(buffer, 0, serializedSize);
                        }
                        finally
                        {
                            out.close();
                        }
                        String st = String.format("Unexpected error deserializing mutation; saved to %s and ignored.  This may be caused by replaying a mutation against a table with the same name but incompatible schema.  Exception follows: ",
                                                  f.getAbsolutePath());
                        logger.error(st, t);
                        continue;
                    }

                    if (logger.isDebugEnabled())
                        logger.debug("replaying mutation for {}.{}: {}", mutation.getKeyspaceName(), ByteBufferUtil.bytesToHex(mutation.key()), "{" + StringUtils.join(mutation.getColumnFamilies().iterator(), ", ") + "}");

                    final long entryLocation = reader.getFilePointer();
                    Runnable runnable = new WrappedRunnable()
                    {
                        public void runMayThrow() throws IOException
                        {
                            if (Schema.instance.getKSMetaData(mutation.getKeyspaceName()) == null)
                                return;
                            if (pointInTimeExceeded(mutation))
                                return;

                            final Keyspace keyspace = Keyspace.open(mutation.getKeyspaceName());

                            // Rebuild the mutation, omitting column families that
                            //    a) the user has requested that we ignore,
                            //    b) have already been flushed,
                            // or c) are part of a cf that was dropped.
                            // Keep in mind that the cf.name() is suspect. do every thing based on the cfid instead.
                            Mutation newMutation = null;
                            for (ColumnFamily columnFamily : replayFilter.filter(mutation))
                            {
                                if (Schema.instance.getCF(columnFamily.id()) == null)
                                    continue; // dropped

                                ReplayPosition rp = cfPositions.get(columnFamily.id());

                                // replay if current segment is newer than last flushed one or,
                                // if it is the last known segment, if we are after the replay position
                                if (segmentId > rp.segment || (segmentId == rp.segment && entryLocation > rp.position))
                                {
                                    if (newMutation == null)
                                        newMutation = new Mutation(mutation.getKeyspaceName(), mutation.key());
                                    newMutation.add(columnFamily);
                                    replayedCount.incrementAndGet();
                                }
                            }
                            if (newMutation != null)
                            {
                                assert !newMutation.isEmpty();
                                Keyspace.open(newMutation.getKeyspaceName()).apply(newMutation, false);
                                keyspacesRecovered.add(keyspace);
                            }
                        }
                    };
                    futures.add(StageManager.getStage(Stage.MUTATION).submit(runnable));
                    if (futures.size() > MAX_OUTSTANDING_REPLAY_COUNT)
                    {
                        FBUtilities.waitOnFutures(futures);
                        futures.clear();
                    }
                }

                if (desc.version < CommitLogDescriptor.VERSION_21)
                    break;

                offset = end + CommitLogSegment.SYNC_MARKER_SIZE;
                prevEnd = end;
            }
        }
        finally
        {
            FileUtils.closeQuietly(reader);
            logger.info("Finished reading {}", file);
        }
    }

    protected boolean pointInTimeExceeded(Mutation fm)
    {
        long restoreTarget = CommitLog.instance.archiver.restorePointInTime;

        for (ColumnFamily families : fm.getColumnFamilies())
        {
            if (CommitLog.instance.archiver.precision.toMillis(families.maxTimestamp()) > restoreTarget)
                return true;
        }
        return false;
    }
}
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