Package org.apache.airavata.gfac.bes.utils

Source Code of org.apache.airavata.gfac.bes.utils.FileUploader

/*
*
* Licensed to the Apache Software Foundation (ASF) under one
* or more contributor license agreements.  See the NOTICE file
* distributed with this work for additional information
* regarding copyright ownership.  The ASF licenses this file
* to you under the Apache License, Version 2.0 (the
* "License"); you may not use this file except in compliance
* with the License.  You may obtain a copy of the License at
*
*   http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing,
* software distributed under the License is distributed on an
* "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY
* KIND, either express or implied.  See the License for the
* specific language governing permissions and limitations
* under the License.
*
*/

package org.apache.airavata.gfac.bes.utils;

import java.io.File;
import java.io.FileInputStream;
import java.io.FileNotFoundException;
import java.io.IOException;
import java.util.Map;

import org.unigrids.services.atomic.types.ProtocolType;

import de.fzj.unicore.uas.client.FileTransferClient;
import de.fzj.unicore.uas.client.StorageClient;
import de.fzj.unicore.uas.client.UFTPConstants;
import de.fzj.unicore.uas.client.UFTPFileTransferClient;
import de.fzj.unicore.uas.fts.FiletransferOptions.IMonitorable;

/**
* upload local file(s) to a remote location
*
* @author schuller
*/
public class FileUploader extends FileTransferBase{

  public FileUploader(String from, String to, Mode mode)throws FileNotFoundException{
    this(from,to,mode,true);
  }

  public FileUploader(String from, String to, Mode mode, boolean failOnError)throws FileNotFoundException{
    this.to=to;
    this.from=from;
    this.mode=mode;
    this.failOnError=failOnError;
    checkOK();
  }

  public String getFrom() {
    return from;
  }

  public String getTo() {
    return to;
  }


  public void perform(StorageClient sms)throws Exception{
    File fileSpec=new File(from);
    boolean hasWildCards=false;
    boolean isDirectory=fileSpec.isDirectory();
    File[] fileset=null;
   
    if(!isDirectory){
      hasWildCards=hasWildCards(fileSpec);
    }
   
    chosenProtocol=sms.findSupportedProtocol(preferredProtocols.toArray(new ProtocolType.Enum[preferredProtocols.size()]));
    Map<String,String>extraParameters=makeExtraParameters(chosenProtocol);

    if(!hasWildCards && !isDirectory){
      //single regular file
      uploadFile(fileSpec,to,sms,chosenProtocol,extraParameters);
      return;
    }
   
    //handle wildcards or directory
    if(hasWildCards){
      fileset=resolveWildCards(fileSpec);
    }
    else{
      fileset=fileSpec.listFiles();
    }
   
    if(!isValidDirectory(to, sms)){
      throw new IOException("The specified remote target '"+to+"' is not a directory");
    }
    if(to==null)to="/";
    String target=isDirectory?to+"/"+fileSpec.getName():to;
    sms.createDirectory(target);
    uploadFiles(fileset,target,sms,chosenProtocol,extraParameters);
  }

  /**
   * upload a set of files to a remote directory (which must exist)
   *
   * @param files
   * @param remoteDirectory
   * @param sms
   * @param protocol
   * @param extraParameters
   * @param msg
   * @throws Exception
   */
  private void uploadFiles(File[]files, String remoteDirectory, StorageClient sms, ProtocolType.Enum protocol,
      Map<String,String>extraParameters)throws Exception{
    for(File localFile: files){
      String target=remoteDirectory+"/"+localFile.getName();
      if(localFile.isDirectory()){
        if(!recurse){
          System.out.println("Skipping directory "+localFile.getAbsolutePath());
        }else{
          File[] fileset=localFile.listFiles();
          sms.createDirectory(target);
          uploadFiles(fileset,target,sms,protocol,extraParameters);
        }
      }else{
        uploadFile(localFile,target,sms,protocol,extraParameters);
      }
    }
  }

  /**
   * uploads a single regular file
   *
   * @param localFile
   * @param remotePath
   * @param sms
   * @param protocol
   * @param extraParameters
   * @param msg
   * @throws Exception
   */
  private void uploadFile(File localFile, String remotePath, StorageClient sms, ProtocolType.Enum protocol,
      Map<String,String>extraParameters) throws Exception{
    long startTime=System.currentTimeMillis();
    FileInputStream is=null;
    FileTransferClient ftc=null;
    try{
      if(remotePath==null){
        remotePath="/"+localFile.getName();
      }
      else if(remotePath.endsWith("/")){
        remotePath+=localFile.getName();
      }
      System.out.println("Uploading local file '"+localFile.getAbsolutePath()+"' -> '"+sms.getUrl()+"#"+remotePath+"'");
      is=new FileInputStream(localFile.getAbsolutePath());
      boolean append=Mode.append.equals(mode);
      ftc=sms.getImport(remotePath, append, extraParameters, protocol);
      configure(ftc, extraParameters);
      if(append)ftc.setAppend(true);
      String url=ftc.getUrl();
      System.out.println("File transfer URL : "+url);
//      ProgressBar p=null;
      if(ftc instanceof IMonitorable){
        long size=localFile.length();
        if(isRange()){
          size=getRangeSize();
        }
//        p=new ProgressBar(localFile.getName(),size,msg);
//        ((IMonitorable) ftc).setProgressListener(p);
      }
      if(isRange()){
        System.out.println("Byte range: "+startByte+" - "+(getRangeSize()>0?endByte:""));
        long skipped=0;
        while(skipped<startByte){
          skipped+=is.skip(startByte);
        }
        ftc.writeAllData(is, endByte-startByte+1);
       
      }else{
        ftc.writeAllData(is);
      }
      copyProperties(localFile, sms, remotePath);
     
//      if(ftc instanceof IMonitorable){
//        p.finish();
//      }
     
    }finally{
      if(ftc!=null){
        try{
          ftc.destroy();
        }catch(Exception e1){
//          msg.error("Could not clean-up the filetransfer at <"+ftc.getUrl()+">",e1);
        }
      }
      try{ if(is!=null)is.close(); }catch(Exception ignored){}
    }
    if(timing){
      long duration=System.currentTimeMillis()-startTime;
      double rate=(double)localFile.length()/(double)duration;
      System.out.println("Rate: "+rate+ " kB/sec.");
    }
  }

  /**
   * if possible, copy the local executable flag to the remote file
   * @param sourceFile - local file
   * @throws Exception
   */
  private void copyProperties(File sourceFile, StorageClient sms, String target)throws Exception{
    boolean x=sourceFile.canExecute();
    try{
      if(x){
        sms.changePermissions(target, true, true, x);
      }
    }catch(Exception ex){
//      System.out.println("Can't set exectuable flag on remote file.",ex);
    }
  }

  private void checkOK()throws FileNotFoundException{
    if(!failOnError){
      return;
    }
    File orig=new File(from);
    if(!orig.isAbsolute()){
      orig=new File(System.getProperty("user.dir"),from);
    }
    File[] files=resolveWildCards(orig);
    if(files==null){
      throw new FileNotFoundException("Local import '"+from+"' does not exist.");
    }
    for(File f: files){
      if(!f.exists())throw new FileNotFoundException("Local import '"+from+"' does not exist.");
    }
  }
 
  private void configure(FileTransferClient ftc, Map<String,String>params){
    if(ftc instanceof UFTPFileTransferClient){
      UFTPFileTransferClient u=(UFTPFileTransferClient)ftc;
      String secret=params.get(UFTPConstants.PARAM_SECRET);
      u.setSecret(secret);
    }
  }
}
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