Examples of org.openbel.framework.api.PathFinder.scan()

Class org.openbel.framework.api.PathFinder

Examples of org.openbel.framework.api.PathFinder.scan()

org.openbel.framework.api.PathFinder.scan()
Finds all paths, if there are any, that scan out from the source {@link KamNode}.
The implementation of the scan algorithm should impose path constraints in order to prevent infinite graph traversal.
@param source {@link KamNode}, the source KAM node to scan out from, which cannot be null @return a populated {@link SimplePath KamPath[]}, or an empty array if no paths were found @throws InvalidArgument Thrown if source is null, or ifsource does not exist within the {@link Kam} to traverse

        final PathFinder pathFinder = new BasicPathFinder(kam);


        final Kam.KamNode[] sourceKamNodes =
                convert(kam, sources);


        final org.openbel.framework.api.SimplePath[] paths = pathFinder
                .scan(sourceKamNodes);


        final List<SimplePath> wsSimplePaths = new ArrayList<SimplePath>(
                paths.length);

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