Examples of org.moltools.lib.seq.Sequence.seqString()


        for (Iterator<? extends NucleotideSequence> i = transferdb.iterator();i.hasNext();) {
          Sequence s = i.next();
          Map<String,String> m = new HashMap<String, String>();
          m.put(SequenceBuilder.PROPERTY_NAME,s.getID());
          m.put(SequenceBuilder.PROPERTY_SEQUENCE_DATA,s.seqString());
          m.put(SequenceBuilder.PROPERTY_ID,s.getID());
          maps.add(m);
        }
        database.addSequences(dbBuilder.buildDB(maps,seqBuilder));
      }

      //ID starts with "Spacer" - spacer tag
      else if (seqID.startsWith("Spacer")) { //$NON-NLS-1$
        seqE = new Element(SPACER,ns);
        seqE.setAttribute(ID,seqID,ns);
        seqE.addContent(new Element(TYPE,ns).addContent(String.valueOf(((NucleotideSequence) seq).getType())));
        seqE.addContent(new Element(SEQUENCE,ns).addContent(seq.seqString()));            
      }
      //Otherwise - normal tag
      else if (seq instanceof NucleotideSequence){
        KeyValue kv = getLibraryTag(libraries,seqID);
        if (kv == null) {

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