Package org.jmol.bspt

Examples of org.jmol.bspt.CubeIterator.foundDistance2()


        )
          continue;
        if (!(isAtomInSetA && isNearInSetB || isAtomInSetB && isNearInSetA))
          continue;
        short order = getBondOrder(myBondingRadius, atomNear
            .getBondingRadiusFloat(), iter.foundDistance2(), minBondDistance2,
            bondTolerance);
        if (order > 0) {
          if (checkValencesAndBond(atom, atomNear, order, mad, bsBonds))
            nNew++;
        }
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