Package org.gvt.model

Examples of org.gvt.model.BioPAXGraph.fetchLayout()

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  private void openPathwayInTab(PathwayHolder p)
  {
    assert p != null;

    BioPAXGraph graph = main.getRootGraph().excise(p);
    boolean layedout = graph.fetchLayout();
    CTabItem tab = main.createNewTab(graph);

    if (refsToHighlight != null && !refsToHighlight.isEmpty())
    {
      ScrollingGraphicalViewer viewer = main.getTabToViewerMap().get(tab);
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    // Replace the graph
    viewer.setContents(newGraph);

    // Use same layout
    boolean layedout = newGraph.fetchLayout();

    if (!layedout)
    {
      new CoSELayoutAction(main).run();
    }
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        }
      }

      graph.setName(name);
      main.createNewTab(graph);
      graph.fetchLayout(original.getPathwayRDFID());
    }
  }
}
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