Package org.broadinstitute.gatk.tools.walkers.varianteval.evaluators

Examples of org.broadinstitute.gatk.tools.walkers.varianteval.evaluators.VariantEvaluator.initialize()


        this.evaluationInstances = new ArrayList<VariantEvaluator>(evaluationClasses.size());

        for ( final Class<? extends VariantEvaluator> c : evaluationClasses ) {
            try {
                final VariantEvaluator eval = c.newInstance();
                if ( doInitialize ) eval.initialize(walker);
                evaluationInstances.add(eval);
            } catch (InstantiationException e) {
                throw new ReviewedGATKException("Unable to instantiate eval module '" + c.getSimpleName() + "'", e);
            } catch (IllegalAccessException e) {
                throw new ReviewedGATKException("Illegal access error when trying to instantiate eval module '" + c.getSimpleName() + "'", e);
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