return result;
}
private List<Haplotype> expandAllHaplotypeCombinations(final String civarString, final String reference) {
final Civar civar = Civar.fromCharSequence(civarString);
final List<Civar> unrolledCivars = civar.optionalizeAll().unroll();
List<Haplotype> result = new ArrayList<>(unrolledCivars.size());
for (final Civar c : unrolledCivars) {
final String baseString = c.applyTo(reference);
final Haplotype haplotype = new Haplotype(baseString.getBytes(),baseString.equals(reference));
haplotype.setGenomeLocation(genomeLocParser.createGenomeLoc("chr1",1,reference.length()));