Package org.broadinstitute.gatk.engine.executive

Examples of org.broadinstitute.gatk.engine.executive.MicroScheduler.execute()


                    (readsDataSource.getReaderIDs().size() > 0 ? String.format(" over %d BAM files", readsDataSource.getReaderIDs().size()) : ""));
        Iterable<Shard> shardStrategy = getShardStrategy(readsDataSource,microScheduler.getReference(),intervals);
        logger.info("Done preparing for traversal");

        // execute the microscheduler, storing the results
        return microScheduler.execute(this.walker, shardStrategy);

        //monitor.stop();
        //logger.info(String.format("Maximum heap size consumed: %d",monitor.getMaxMemoryUsed()));

        //return result;
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