boolean mf = (gamma > 0 && ft) || (gamma < 0 && !ft);
createModulation(t.M, t.F, t.T, ft, mf, model, map);
}
SimpleExporter se = new SimpleExporter(BioPAXLevel.L3);
se.convertToOWL(model, new FileOutputStream(filename));
}
private static void createGene(Gene g, Model model, Map<String, BioPAXElement> map)
{
if (map.containsKey(g.geneid)) return;