Package org.apache.mahout.math

Examples of org.apache.mahout.math.DenseVector.clone()

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            updater.update(currentEigen, corpus.getRow(corpusRow), state);
        }
        state.setFirstPass(false);
        if (debug) {
          if (previousEigen == null) {
            previousEigen = currentEigen.clone();
          } else {
            double dot = currentEigen.dot(previousEigen);
            if (dot > 0) {
              dot /= (currentEigen.norm(2) * previousEigen.norm(2));
            }
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    initData(1, 0.25, measure);
    Canopy cluster = new Canopy(new DenseVector(new double[] { 0, 0 }), 19, measure);
    clusters.add(cluster);
    List<VectorWritable> points = new ArrayList<VectorWritable>();
    Vector delta = new DenseVector(new double[] { 0, Double.MIN_NORMAL });
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    representativePoints.put(cluster.getId(), points);
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    Canopy cluster = new Canopy(new DenseVector(new double[] { 0, 0 }), 19, measure);
    clusters.add(cluster);
    List<VectorWritable> points = new ArrayList<VectorWritable>();
    Vector delta = new DenseVector(new double[] { 0, Double.MIN_NORMAL });
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    representativePoints.put(cluster.getId(), points);
    CDbwEvaluator evaluator = new CDbwEvaluator(representativePoints, clusters, measure);
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    clusters.add(cluster);
    List<VectorWritable> points = new ArrayList<VectorWritable>();
    Vector delta = new DenseVector(new double[] { 0, Double.MIN_NORMAL });
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    representativePoints.put(cluster.getId(), points);
    CDbwEvaluator evaluator = new CDbwEvaluator(representativePoints, clusters, measure);
    assertEquals("inter cluster density", 0.0, evaluator.interClusterDensity(), EPSILON);
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    List<VectorWritable> points = new ArrayList<VectorWritable>();
    Vector delta = new DenseVector(new double[] { 0, Double.MIN_NORMAL });
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    representativePoints.put(cluster.getId(), points);
    CDbwEvaluator evaluator = new CDbwEvaluator(representativePoints, clusters, measure);
    assertEquals("inter cluster density", 0.0, evaluator.interClusterDensity(), EPSILON);
    assertEquals("separation", 28.970562748477143, evaluator.separation(), EPSILON);
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    Vector delta = new DenseVector(new double[] { 0, Double.MIN_NORMAL });
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    representativePoints.put(cluster.getId(), points);
    CDbwEvaluator evaluator = new CDbwEvaluator(representativePoints, clusters, measure);
    assertEquals("inter cluster density", 0.0, evaluator.interClusterDensity(), EPSILON);
    assertEquals("separation", 28.970562748477143, evaluator.separation(), EPSILON);
    assertEquals("intra cluster density", 1.8, evaluator.intraClusterDensity(), EPSILON);
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          }
        }
        state.setFirstPass(false);
        if (debug) {
          if (previousEigen == null) {
            previousEigen = currentEigen.clone();
          } else {
            double dot = currentEigen.dot(previousEigen);
            if (dot > 0) {
              dot /= (currentEigen.norm(2) * previousEigen.norm(2));
            }
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    Canopy cluster = new Canopy(new DenseVector(new double[] {0, 0}), 19,
        measure);
    clusters.add(cluster);
    List<VectorWritable> points = Lists.newArrayList();
    Vector delta = new DenseVector(new double[] { 0, Double.MIN_NORMAL });
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    representativePoints.put(cluster.getId(), points);
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        measure);
    clusters.add(cluster);
    List<VectorWritable> points = Lists.newArrayList();
    Vector delta = new DenseVector(new double[] { 0, Double.MIN_NORMAL });
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    representativePoints.put(cluster.getId(), points);
    CDbwEvaluator evaluator = new CDbwEvaluator(representativePoints, clusters,
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    clusters.add(cluster);
    List<VectorWritable> points = Lists.newArrayList();
    Vector delta = new DenseVector(new double[] { 0, Double.MIN_NORMAL });
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    points.add(new VectorWritable(delta.clone()));
    representativePoints.put(cluster.getId(), points);
    CDbwEvaluator evaluator = new CDbwEvaluator(representativePoints, clusters,
        measure);
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