Package org.apache.airavata.gsi.ssh.api

Examples of org.apache.airavata.gsi.ssh.api.Cluster.makeDirectory()

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            log.info("Successfully retrieved the Security Context");
        }
        ApplicationDeploymentDescriptionType app = jobExecutionContext.getApplicationContext().getApplicationDeploymentDescription().getType();

            String workingDirectory = app.getScratchWorkingDirectory();
            cluster.makeDirectory(workingDirectory);
            cluster.makeDirectory(app.getScratchWorkingDirectory());
            cluster.makeDirectory(app.getInputDataDirectory());
            cluster.makeDirectory(app.getOutputDataDirectory());
            DataTransferDetails detail = new DataTransferDetails();
            TransferStatus status = new TransferStatus();
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        }
        ApplicationDeploymentDescriptionType app = jobExecutionContext.getApplicationContext().getApplicationDeploymentDescription().getType();

            String workingDirectory = app.getScratchWorkingDirectory();
            cluster.makeDirectory(workingDirectory);
            cluster.makeDirectory(app.getScratchWorkingDirectory());
            cluster.makeDirectory(app.getInputDataDirectory());
            cluster.makeDirectory(app.getOutputDataDirectory());
            DataTransferDetails detail = new DataTransferDetails();
            TransferStatus status = new TransferStatus();
            status.setTransferState(TransferState.DIRECTORY_SETUP);
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        ApplicationDeploymentDescriptionType app = jobExecutionContext.getApplicationContext().getApplicationDeploymentDescription().getType();

            String workingDirectory = app.getScratchWorkingDirectory();
            cluster.makeDirectory(workingDirectory);
            cluster.makeDirectory(app.getScratchWorkingDirectory());
            cluster.makeDirectory(app.getInputDataDirectory());
            cluster.makeDirectory(app.getOutputDataDirectory());
            DataTransferDetails detail = new DataTransferDetails();
            TransferStatus status = new TransferStatus();
            status.setTransferState(TransferState.DIRECTORY_SETUP);
            detail.setTransferStatus(status);
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            String workingDirectory = app.getScratchWorkingDirectory();
            cluster.makeDirectory(workingDirectory);
            cluster.makeDirectory(app.getScratchWorkingDirectory());
            cluster.makeDirectory(app.getInputDataDirectory());
            cluster.makeDirectory(app.getOutputDataDirectory());
            DataTransferDetails detail = new DataTransferDetails();
            TransferStatus status = new TransferStatus();
            status.setTransferState(TransferState.DIRECTORY_SETUP);
            detail.setTransferStatus(status);
            detail.setTransferDescription("Working directory = " + workingDirectory);
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            ServerInfo serverInfo = new ServerInfo(this.userName, this.hostName);

            Cluster pbsCluster = new PBSCluster(serverInfo, authenticationInfo, CommonUtils.getPBSJobManager("/opt/torque/torque-4.2.3.1/bin/"));
            outputPath = outputPath + File.separator + jobExecutionContext.getExperimentID() + "-" + jobExecutionContext.getTaskData().getTaskID()
                    + File.separator;
            pbsCluster.makeDirectory(outputPath);
            pbsCluster.scpTo(outputPath, standardError);
            pbsCluster.scpTo(outputPath, standardOutput);
            List<DataObjectType> outputArray = new ArrayList<DataObjectType>();
            Map<String, Object> output = jobExecutionContext.getOutMessageContext().getParameters();
            Set<String> keys = output.keySet();
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        } else {
            log.info("Successfully retrieved the Security Context");
        }
        ApplicationDeploymentDescriptionType app = jobExecutionContext.getApplicationContext().getApplicationDeploymentDescription().getType();
            String workingDirectory = app.getScratchWorkingDirectory();
            cluster.makeDirectory(workingDirectory);
            cluster.makeDirectory(app.getScratchWorkingDirectory());
            cluster.makeDirectory(app.getInputDataDirectory());
            cluster.makeDirectory(app.getOutputDataDirectory());
            DataTransferDetails detail = new DataTransferDetails();
            TransferStatus status = new TransferStatus();
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            log.info("Successfully retrieved the Security Context");
        }
        ApplicationDeploymentDescriptionType app = jobExecutionContext.getApplicationContext().getApplicationDeploymentDescription().getType();
            String workingDirectory = app.getScratchWorkingDirectory();
            cluster.makeDirectory(workingDirectory);
            cluster.makeDirectory(app.getScratchWorkingDirectory());
            cluster.makeDirectory(app.getInputDataDirectory());
            cluster.makeDirectory(app.getOutputDataDirectory());
            DataTransferDetails detail = new DataTransferDetails();
            TransferStatus status = new TransferStatus();
            status.setTransferState(TransferState.DIRECTORY_SETUP);
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        }
        ApplicationDeploymentDescriptionType app = jobExecutionContext.getApplicationContext().getApplicationDeploymentDescription().getType();
            String workingDirectory = app.getScratchWorkingDirectory();
            cluster.makeDirectory(workingDirectory);
            cluster.makeDirectory(app.getScratchWorkingDirectory());
            cluster.makeDirectory(app.getInputDataDirectory());
            cluster.makeDirectory(app.getOutputDataDirectory());
            DataTransferDetails detail = new DataTransferDetails();
            TransferStatus status = new TransferStatus();
            status.setTransferState(TransferState.DIRECTORY_SETUP);
            detail.setTransferStatus(status);
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        ApplicationDeploymentDescriptionType app = jobExecutionContext.getApplicationContext().getApplicationDeploymentDescription().getType();
            String workingDirectory = app.getScratchWorkingDirectory();
            cluster.makeDirectory(workingDirectory);
            cluster.makeDirectory(app.getScratchWorkingDirectory());
            cluster.makeDirectory(app.getInputDataDirectory());
            cluster.makeDirectory(app.getOutputDataDirectory());
            DataTransferDetails detail = new DataTransferDetails();
            TransferStatus status = new TransferStatus();
            status.setTransferState(TransferState.DIRECTORY_SETUP);
            detail.setTransferStatus(status);
            detail.setTransferDescription("Working directory = " + workingDirectory);
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            log.info("Successfully retrieved the Security Context");
        }
        ApplicationDeploymentDescriptionType app = jobExecutionContext.getApplicationContext().getApplicationDeploymentDescription().getType();

            String workingDirectory = app.getScratchWorkingDirectory();
            cluster.makeDirectory(workingDirectory);
            cluster.makeDirectory(app.getScratchWorkingDirectory());
            cluster.makeDirectory(app.getInputDataDirectory());
            cluster.makeDirectory(app.getOutputDataDirectory());
            DataTransferDetails detail = new DataTransferDetails();
            TransferStatus status = new TransferStatus();
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