if(r[2].equalsIgnoreCase(std)){
String id= r[0];
double loc= Double.parseDouble(r[3]);
String chr= r[1].substring(0,r[1].length()-12).toLowerCase();
if(ind!=0){
if(gba.containsChromosome(pc)){
if(pc.equals(chr)){
GenomicRegion gr= new GenomicRegion(pc, (int)pp, (int)loc-1);
ptr.put(pid, gr);
}else{
double cl= gba.getRegionsForChromosome(pc).get(0).high;